Protein–RNA interactions for Protein: Q60649

Clpb, Caseinolytic peptidase B protein homolog, mousemouse

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClpbQ60649 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
ClpbQ60649 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
ClpbQ60649 Gm27177-202ENSMUST00000183514 2703 ntBASIC11.96□□□□□ -0.49
ClpbQ60649 Ibtk-201ENSMUST00000039213 5650 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
ClpbQ60649 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
ClpbQ60649 Elovl3-201ENSMUST00000043739 1494 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
ClpbQ60649 Gata3-201ENSMUST00000102976 3215 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
ClpbQ60649 Mast1-201ENSMUST00000109741 4872 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
ClpbQ60649 Nup62cl-201ENSMUST00000101212 1996 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
ClpbQ60649 Sgk1-204ENSMUST00000120509 3096 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
ClpbQ60649 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
ClpbQ60649 Ppfia4-205ENSMUST00000189361 5238 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.49
ClpbQ60649 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
ClpbQ60649 Vmn1r45-207ENSMUST00000228492 2849 ntBASIC11.96□□□□□ -0.49
ClpbQ60649 Snord83b-201ENSMUST00000104546 94 ntBASIC11.96□□□□□ -0.49
ClpbQ60649 E130114P18Rik-202ENSMUST00000107068 1132 ntAPPRIS P5 TSL 3 BASIC11.96□□□□□ -0.49
ClpbQ60649 Fzr1-202ENSMUST00000118812 1215 ntTSL 5 BASIC11.96□□□□□ -0.49
ClpbQ60649 Gm13492-201ENSMUST00000119772 665 ntBASIC11.96□□□□□ -0.49
ClpbQ60649 Gm13786-201ENSMUST00000122371 333 ntBASIC11.96□□□□□ -0.49
ClpbQ60649 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
ClpbQ60649 C030047K22Rik-201ENSMUST00000150382 1164 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
ClpbQ60649 Gm26542-201ENSMUST00000180443 1235 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
ClpbQ60649 Gm27516-201ENSMUST00000184237 98 ntBASIC11.96□□□□□ -0.49
ClpbQ60649 Gm43822-201ENSMUST00000200285 476 ntBASIC11.96□□□□□ -0.49
ClpbQ60649 Tmem176b-206ENSMUST00000203355 1202 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
ClpbQ60649 Tmem176b-209ENSMUST00000204073 986 ntAPPRIS P1 TSL 2 BASIC11.96□□□□□ -0.49
ClpbQ60649 Gm44702-201ENSMUST00000209194 592 ntTSL 3 BASIC11.96□□□□□ -0.49
ClpbQ60649 Gm45437-201ENSMUST00000209998 448 ntTSL 3 BASIC11.96□□□□□ -0.49
ClpbQ60649 Gm39318-201ENSMUST00000214606 1118 ntTSL 3 BASIC11.96□□□□□ -0.49
ClpbQ60649 1700029I15Rik-201ENSMUST00000054316 364 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
ClpbQ60649 Gm26035-201ENSMUST00000083065 308 ntBASIC11.96□□□□□ -0.49
ClpbQ60649 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
ClpbQ60649 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.49
ClpbQ60649 Abcg8-203ENSMUST00000171915 2284 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
ClpbQ60649 Pappa-201ENSMUST00000084501 11027 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
ClpbQ60649 Asap1-201ENSMUST00000023008 4580 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.5
ClpbQ60649 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
ClpbQ60649 Stat3-203ENSMUST00000127638 4516 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.5
ClpbQ60649 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.5
ClpbQ60649 Gm4219-201ENSMUST00000168140 2143 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
ClpbQ60649 Acvrl1-205ENSMUST00000120754 3506 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.5
ClpbQ60649 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
ClpbQ60649 Crtc1-201ENSMUST00000076615 5683 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
ClpbQ60649 Camsap3-203ENSMUST00000207077 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.5
ClpbQ60649 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.5
ClpbQ60649 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
ClpbQ60649 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
ClpbQ60649 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.5
ClpbQ60649 Cramp1l-201ENSMUST00000073337 7517 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
ClpbQ60649 Gm5780-201ENSMUST00000217774 1834 ntBASIC11.95□□□□□ -0.5
ClpbQ60649 Rasgef1a-202ENSMUST00000203482 2227 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
ClpbQ60649 AC164702.1-201ENSMUST00000220135 2212 ntBASIC11.95□□□□□ -0.5
ClpbQ60649 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
ClpbQ60649 Emx2os-201ENSMUST00000136990 5023 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
ClpbQ60649 Satb2-202ENSMUST00000114415 5805 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
ClpbQ60649 Usp24-204ENSMUST00000165709 10594 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
ClpbQ60649 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
ClpbQ60649 Tcp10b-202ENSMUST00000116666 2588 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
ClpbQ60649 Gm42890-202ENSMUST00000167642 2566 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
ClpbQ60649 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
ClpbQ60649 Fam217b-201ENSMUST00000094251 4541 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
ClpbQ60649 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC11.95□□□□□ -0.5
ClpbQ60649 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
ClpbQ60649 Uggt2-212ENSMUST00000156203 6456 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
ClpbQ60649 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
ClpbQ60649 Gm14921-201ENSMUST00000118643 908 ntBASIC11.95□□□□□ -0.5
ClpbQ60649 Gm14723-201ENSMUST00000118686 215 ntBASIC11.95□□□□□ -0.5
ClpbQ60649 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
ClpbQ60649 Med9os-203ENSMUST00000146334 527 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
ClpbQ60649 Gm5637-201ENSMUST00000153890 1119 ntBASIC11.95□□□□□ -0.5
ClpbQ60649 Tead1-207ENSMUST00000165036 1248 ntTSL 5 BASIC11.95□□□□□ -0.5
ClpbQ60649 Tead1-212ENSMUST00000171197 1074 ntTSL 5 BASIC11.95□□□□□ -0.5
ClpbQ60649 Pagr1b-201ENSMUST00000172958 693 ntAPPRIS P1 TSL 3 BASIC11.95□□□□□ -0.5
ClpbQ60649 Fkbp2-202ENSMUST00000177752 627 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
ClpbQ60649 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC11.95□□□□□ -0.5
ClpbQ60649 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC11.95□□□□□ -0.5
ClpbQ60649 Fam168a-206ENSMUST00000208013 1129 ntTSL 5 BASIC11.95□□□□□ -0.5
ClpbQ60649 Stambp-ps1-201ENSMUST00000209280 1208 ntBASIC11.95□□□□□ -0.5
ClpbQ60649 Mt3-203ENSMUST00000211930 477 ntTSL 2 BASIC11.95□□□□□ -0.5
ClpbQ60649 Gm7172-201ENSMUST00000218047 1152 ntBASIC11.95□□□□□ -0.5
ClpbQ60649 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
ClpbQ60649 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
ClpbQ60649 Gm6992-201ENSMUST00000217973 1607 ntBASIC11.95□□□□□ -0.5
ClpbQ60649 Serpinb2-202ENSMUST00000064916 1996 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
ClpbQ60649 Gm43721-201ENSMUST00000199677 2313 ntBASIC11.95□□□□□ -0.5
ClpbQ60649 Etf1-201ENSMUST00000025218 3709 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
ClpbQ60649 Uap1l1-201ENSMUST00000102925 3349 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
ClpbQ60649 Kcnn1-204ENSMUST00000212086 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
ClpbQ60649 Myh2-203ENSMUST00000170159 6083 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
ClpbQ60649 Tfe3-204ENSMUST00000115677 2943 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
ClpbQ60649 Nupl1-206ENSMUST00000225111 2936 ntBASIC11.95□□□□□ -0.5
ClpbQ60649 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
ClpbQ60649 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
ClpbQ60649 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
ClpbQ60649 Epha5-202ENSMUST00000113398 4830 ntTSL 5 BASIC11.95□□□□□ -0.5
ClpbQ60649 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
ClpbQ60649 Sesn2-201ENSMUST00000030724 3475 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
ClpbQ60649 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
ClpbQ60649 Gm2420-201ENSMUST00000119864 2149 ntBASIC11.95□□□□□ -0.5
ClpbQ60649 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 33.1 ms