Protein–RNA interactions for Protein: Q60641

Nr1h4, Bile acid receptor, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1h4Q60641 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Nr1h4Q60641 Akap12-201ENSMUST00000045730 6195 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Nr1h4Q60641 Lamb3-209ENSMUST00000194677 4867 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Nr1h4Q60641 1700001L05Rik-201ENSMUST00000100370 2270 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Nr1h4Q60641 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Nr1h4Q60641 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Nr1h4Q60641 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Nr1h4Q60641 Bach1-201ENSMUST00000026703 5867 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Nr1h4Q60641 Mob1a-201ENSMUST00000038658 4119 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Nr1h4Q60641 Usp14-201ENSMUST00000092096 2360 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Nr1h4Q60641 Adi1-201ENSMUST00000020957 1652 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Nr1h4Q60641 Kcnh6-202ENSMUST00000106903 2816 ntTSL 5 BASIC11.87□□□□□ -0.51
Nr1h4Q60641 Zmynd8-203ENSMUST00000099084 5232 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Nr1h4Q60641 Chd3-202ENSMUST00000108661 7261 ntAPPRIS P2 TSL 5 BASIC11.87□□□□□ -0.51
Nr1h4Q60641 Rac1-201ENSMUST00000080537 4159 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Nr1h4Q60641 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Nr1h4Q60641 Gm37368-201ENSMUST00000193173 3212 ntBASIC11.87□□□□□ -0.51
Nr1h4Q60641 Fli1-201ENSMUST00000016231 3318 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Nr1h4Q60641 Ppara-203ENSMUST00000109423 2519 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Nr1h4Q60641 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC11.87□□□□□ -0.51
Nr1h4Q60641 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Nr1h4Q60641 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Nr1h4Q60641 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Nr1h4Q60641 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Nr1h4Q60641 Gm8805-201ENSMUST00000117848 313 ntBASIC11.87□□□□□ -0.51
Nr1h4Q60641 Gm8213-201ENSMUST00000118191 441 ntBASIC11.87□□□□□ -0.51
Nr1h4Q60641 Gm13612-201ENSMUST00000119276 390 ntBASIC11.87□□□□□ -0.51
Nr1h4Q60641 Gm13123-201ENSMUST00000122173 492 ntBASIC11.87□□□□□ -0.51
Nr1h4Q60641 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Nr1h4Q60641 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC11.87□□□□□ -0.51
Nr1h4Q60641 Gm38671-201ENSMUST00000200573 130 ntBASIC11.87□□□□□ -0.51
Nr1h4Q60641 Gm42599-201ENSMUST00000201308 469 ntBASIC11.87□□□□□ -0.51
Nr1h4Q60641 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC11.87□□□□□ -0.51
Nr1h4Q60641 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC11.87□□□□□ -0.51
Nr1h4Q60641 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC11.87□□□□□ -0.51
Nr1h4Q60641 AC155252.1-201ENSMUST00000226462 1208 ntBASIC11.87□□□□□ -0.51
Nr1h4Q60641 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Nr1h4Q60641 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Nr1h4Q60641 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
Nr1h4Q60641 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Nr1h4Q60641 Olfr1423-201ENSMUST00000087831 933 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
Nr1h4Q60641 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC11.87□□□□□ -0.51
Nr1h4Q60641 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Nr1h4Q60641 Madd-208ENSMUST00000111370 5879 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Nr1h4Q60641 Madd-214ENSMUST00000111381 5873 ntAPPRIS ALT2 TSL 2 BASIC11.87□□□□□ -0.51
Nr1h4Q60641 Csrnp3-207ENSMUST00000145598 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Nr1h4Q60641 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Nr1h4Q60641 Gm43365-201ENSMUST00000196522 2106 ntBASIC11.87□□□□□ -0.51
Nr1h4Q60641 Camk1d-201ENSMUST00000044009 6962 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Nr1h4Q60641 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Nr1h4Q60641 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Nr1h4Q60641 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Nr1h4Q60641 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Nr1h4Q60641 Sesn2-201ENSMUST00000030724 3475 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Nr1h4Q60641 P2rx7-203ENSMUST00000100737 4936 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Nr1h4Q60641 Oxnad1-201ENSMUST00000022462 2376 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Nr1h4Q60641 Acta1-201ENSMUST00000034453 1446 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Nr1h4Q60641 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC11.86□□□□□ -0.51
Nr1h4Q60641 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC11.86□□□□□ -0.51
Nr1h4Q60641 Rspo3-201ENSMUST00000092623 3085 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Nr1h4Q60641 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Nr1h4Q60641 Lta4h-201ENSMUST00000016033 2029 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Nr1h4Q60641 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Nr1h4Q60641 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Nr1h4Q60641 Slx4ip-206ENSMUST00000180277 2723 ntAPPRIS P1 TSL 3 BASIC11.86□□□□□ -0.51
Nr1h4Q60641 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Nr1h4Q60641 Tm9sf2-201ENSMUST00000026624 3107 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Nr1h4Q60641 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC11.86□□□□□ -0.51
Nr1h4Q60641 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Nr1h4Q60641 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Nr1h4Q60641 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC11.86□□□□□ -0.51
Nr1h4Q60641 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Nr1h4Q60641 Gm37922-201ENSMUST00000195596 455 ntBASIC11.86□□□□□ -0.51
Nr1h4Q60641 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC11.86□□□□□ -0.51
Nr1h4Q60641 Gm35960-201ENSMUST00000202712 767 ntBASIC11.86□□□□□ -0.51
Nr1h4Q60641 Gm8463-201ENSMUST00000208573 613 ntBASIC11.86□□□□□ -0.51
Nr1h4Q60641 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC11.86□□□□□ -0.51
Nr1h4Q60641 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC11.86□□□□□ -0.51
Nr1h4Q60641 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC11.86□□□□□ -0.51
Nr1h4Q60641 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Nr1h4Q60641 Atl3-202ENSMUST00000170373 6474 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Nr1h4Q60641 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Nr1h4Q60641 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC11.86□□□□□ -0.51
Nr1h4Q60641 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC11.86□□□□□ -0.51
Nr1h4Q60641 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Nr1h4Q60641 4933412E12Rik-201ENSMUST00000217853 1698 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Nr1h4Q60641 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Nr1h4Q60641 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Nr1h4Q60641 Umod-206ENSMUST00000209095 2571 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Nr1h4Q60641 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Nr1h4Q60641 Plin4-202ENSMUST00000190703 5756 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Nr1h4Q60641 Epha5-206ENSMUST00000113406 4606 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Nr1h4Q60641 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Nr1h4Q60641 Fosb-203ENSMUST00000207716 3546 ntTSL 5 BASIC11.86□□□□□ -0.51
Nr1h4Q60641 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC11.86□□□□□ -0.51
Nr1h4Q60641 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC11.86□□□□□ -0.51
Nr1h4Q60641 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC11.86□□□□□ -0.51
Nr1h4Q60641 Gm6992-201ENSMUST00000217973 1607 ntBASIC11.86□□□□□ -0.51
Nr1h4Q60641 Cbl-211ENSMUST00000206720 11372 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Nr1h4Q60641 Ripk4-202ENSMUST00000113743 3743 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 34.5 ms