Protein–RNA interactions for Protein: Q60596

Xrcc1, DNA repair protein XRCC1, mousemouse

Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Xrcc1Q60596 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Xrcc1Q60596 E230029C05Rik-205ENSMUST00000208362 2444 ntTSL 2 BASIC11.91□□□□□ -0.5
Xrcc1Q60596 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Xrcc1Q60596 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Xrcc1Q60596 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Xrcc1Q60596 Madd-209ENSMUST00000111371 5816 ntAPPRIS ALT2 TSL 2 BASIC11.91□□□□□ -0.5
Xrcc1Q60596 Madd-210ENSMUST00000111372 5813 ntAPPRIS ALT2 TSL 2 BASIC11.91□□□□□ -0.5
Xrcc1Q60596 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Xrcc1Q60596 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Xrcc1Q60596 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Xrcc1Q60596 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Xrcc1Q60596 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Xrcc1Q60596 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC11.91□□□□□ -0.5
Xrcc1Q60596 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Xrcc1Q60596 Bmp3-201ENSMUST00000031278 6548 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Xrcc1Q60596 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Xrcc1Q60596 Cacna1g-205ENSMUST00000107786 7984 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Xrcc1Q60596 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Xrcc1Q60596 Gm22323-201ENSMUST00000103832 109 ntBASIC11.91□□□□□ -0.5
Xrcc1Q60596 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Xrcc1Q60596 Smyd3-202ENSMUST00000111134 1229 ntTSL 2 BASIC11.91□□□□□ -0.5
Xrcc1Q60596 Tmsb10-201ENSMUST00000114048 623 ntAPPRIS P1 TSL 3 BASIC11.91□□□□□ -0.5
Xrcc1Q60596 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC11.91□□□□□ -0.5
Xrcc1Q60596 Gm14999-201ENSMUST00000121039 624 ntBASIC11.91□□□□□ -0.5
Xrcc1Q60596 Tex22-201ENSMUST00000012355 1267 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Xrcc1Q60596 Gm15395-201ENSMUST00000153724 702 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Xrcc1Q60596 Gstp1-201ENSMUST00000169613 757 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Xrcc1Q60596 Gm17028-201ENSMUST00000170026 704 ntTSL 3 BASIC11.91□□□□□ -0.5
Xrcc1Q60596 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Xrcc1Q60596 Gm7118-201ENSMUST00000200167 1003 ntBASIC11.91□□□□□ -0.5
Xrcc1Q60596 Txndc17-201ENSMUST00000021158 981 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Xrcc1Q60596 AC113031.8-201ENSMUST00000227856 631 ntBASIC11.91□□□□□ -0.5
Xrcc1Q60596 Mea1-201ENSMUST00000002845 840 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Xrcc1Q60596 Gm3402-201ENSMUST00000036715 981 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Xrcc1Q60596 Asphd1-201ENSMUST00000052937 730 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Xrcc1Q60596 Cluap1-201ENSMUST00000040881 1779 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Xrcc1Q60596 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC11.91□□□□□ -0.5
Xrcc1Q60596 Clpb-201ENSMUST00000001884 4627 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Xrcc1Q60596 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC11.91□□□□□ -0.5
Xrcc1Q60596 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Xrcc1Q60596 Tjp3-205ENSMUST00000219479 2901 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Xrcc1Q60596 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Xrcc1Q60596 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Xrcc1Q60596 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Xrcc1Q60596 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Xrcc1Q60596 Ltbp2-202ENSMUST00000110254 6602 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Xrcc1Q60596 Chrna10-201ENSMUST00000084830 2513 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Xrcc1Q60596 Dysf-205ENSMUST00000113823 6578 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Xrcc1Q60596 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Xrcc1Q60596 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Xrcc1Q60596 Kdm5b-201ENSMUST00000047714 8714 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Xrcc1Q60596 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC11.91□□□□□ -0.5
Xrcc1Q60596 Cpne1-201ENSMUST00000079312 1683 ntTSL 5 BASIC11.91□□□□□ -0.5
Xrcc1Q60596 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Xrcc1Q60596 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC11.9□□□□□ -0.5
Xrcc1Q60596 Tubb2a-ps2-201ENSMUST00000221547 1339 ntBASIC11.9□□□□□ -0.5
Xrcc1Q60596 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC11.9□□□□□ -0.5
Xrcc1Q60596 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Xrcc1Q60596 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC11.9□□□□□ -0.5
Xrcc1Q60596 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Xrcc1Q60596 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Xrcc1Q60596 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Xrcc1Q60596 Rbm3-ps-201ENSMUST00000121422 465 ntBASIC11.9□□□□□ -0.5
Xrcc1Q60596 Gm16087-201ENSMUST00000124395 964 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Xrcc1Q60596 Gm13570-201ENSMUST00000140763 309 ntBASIC11.9□□□□□ -0.5
Xrcc1Q60596 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Xrcc1Q60596 C230066G23Rik-201ENSMUST00000150195 650 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Xrcc1Q60596 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Xrcc1Q60596 Gm16555-201ENSMUST00000159971 1199 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Xrcc1Q60596 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC11.9□□□□□ -0.5
Xrcc1Q60596 Six4-202ENSMUST00000175693 6817 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
Xrcc1Q60596 Gm7584-201ENSMUST00000175829 940 ntBASIC11.9□□□□□ -0.5
Xrcc1Q60596 Hax1-206ENSMUST00000197786 857 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Xrcc1Q60596 Nmbr-201ENSMUST00000020015 1599 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Xrcc1Q60596 Gm4780-202ENSMUST00000215200 2644 ntBASIC11.9□□□□□ -0.5
Xrcc1Q60596 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC11.9□□□□□ -0.5
Xrcc1Q60596 Gm33115-201ENSMUST00000220913 743 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Xrcc1Q60596 AC122371.3-201ENSMUST00000223402 1061 ntBASIC11.9□□□□□ -0.5
Xrcc1Q60596 Mlana-201ENSMUST00000025719 623 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Xrcc1Q60596 Rps3a1-201ENSMUST00000029722 977 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Xrcc1Q60596 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Xrcc1Q60596 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Xrcc1Q60596 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC11.9□□□□□ -0.5
Xrcc1Q60596 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
Xrcc1Q60596 Kif3b-201ENSMUST00000028977 5635 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Xrcc1Q60596 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Xrcc1Q60596 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC11.9□□□□□ -0.5
Xrcc1Q60596 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Xrcc1Q60596 Gm38385-201ENSMUST00000194454 2351 ntBASIC11.9□□□□□ -0.51
Xrcc1Q60596 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC11.9□□□□□ -0.51
Xrcc1Q60596 Gm44942-201ENSMUST00000096093 2072 ntBASIC11.9□□□□□ -0.51
Xrcc1Q60596 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC11.9□□□□□ -0.51
Xrcc1Q60596 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Xrcc1Q60596 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Xrcc1Q60596 AI661453-202ENSMUST00000150819 4866 ntAPPRIS P2 TSL 5 BASIC11.89□□□□□ -0.51
Xrcc1Q60596 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC11.89□□□□□ -0.51
Xrcc1Q60596 Gm18227-201ENSMUST00000211082 1468 ntBASIC11.89□□□□□ -0.51
Xrcc1Q60596 Nrsn2-201ENSMUST00000079278 1455 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Xrcc1Q60596 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC11.89□□□□□ -0.51
Xrcc1Q60596 Adora1-202ENSMUST00000086465 4968 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 56.5 ms