Protein–RNA interactions for Protein: Q3U6N9

UPF0488 protein C8orf33 homolog, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q3U6N9 Armc8-201ENSMUST00000035043 4647 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Q3U6N9 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Q3U6N9 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Q3U6N9 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
Q3U6N9 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Q3U6N9 Bad-201ENSMUST00000025910 1451 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Q3U6N9 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Q3U6N9 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Q3U6N9 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Q3U6N9 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Q3U6N9 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Q3U6N9 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC11.82□□□□□ -0.52
Q3U6N9 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Q3U6N9 Slc2a4-203ENSMUST00000141837 1776 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Q3U6N9 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Q3U6N9 Gm43721-201ENSMUST00000199677 2313 ntBASIC11.82□□□□□ -0.52
Q3U6N9 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Q3U6N9 Gm38346-201ENSMUST00000192379 2639 ntBASIC11.82□□□□□ -0.52
Q3U6N9 Lrrfip2-213ENSMUST00000216430 1525 ntTSL 5 BASIC11.82□□□□□ -0.52
Q3U6N9 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Q3U6N9 Gm44929-202ENSMUST00000209134 1653 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Q3U6N9 Pcdha2-202ENSMUST00000195590 4645 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Q3U6N9 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Q3U6N9 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Q3U6N9 Ighv5-2-201ENSMUST00000103442 350 ntAPPRIS ALT2 BASIC11.82□□□□□ -0.52
Q3U6N9 Cstl1-202ENSMUST00000109954 454 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Q3U6N9 Gm12201-201ENSMUST00000120657 1234 ntBASIC11.82□□□□□ -0.52
Q3U6N9 Bcas3os2-201ENSMUST00000134305 661 ntTSL 5 BASIC11.82□□□□□ -0.52
Q3U6N9 Gm33222-201ENSMUST00000193725 654 ntTSL 3 BASIC11.82□□□□□ -0.52
Q3U6N9 Gm18711-201ENSMUST00000199341 750 ntBASIC11.82□□□□□ -0.52
Q3U6N9 Gm44136-201ENSMUST00000203819 1106 ntBASIC11.82□□□□□ -0.52
Q3U6N9 Gm45021-201ENSMUST00000204521 369 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Q3U6N9 Gm45799-208ENSMUST00000211054 490 ntAPPRIS P2 TSL 3 BASIC11.82□□□□□ -0.52
Q3U6N9 Cotl1-203ENSMUST00000211873 826 ntTSL 5 BASIC11.82□□□□□ -0.52
Q3U6N9 Gm270-201ENSMUST00000223010 976 ntBASIC11.82□□□□□ -0.52
Q3U6N9 Cga-201ENSMUST00000029975 687 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Q3U6N9 Pdik1l-201ENSMUST00000061234 4686 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Q3U6N9 Krtap19-1-201ENSMUST00000081334 493 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Q3U6N9 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC11.82□□□□□ -0.52
Q3U6N9 Abhd6-201ENSMUST00000026313 1401 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Q3U6N9 F830115B05Rik-201ENSMUST00000197638 1894 ntBASIC11.82□□□□□ -0.52
Q3U6N9 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Q3U6N9 Acadsb-201ENSMUST00000015829 6081 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Q3U6N9 Ppip5k1-202ENSMUST00000110625 5226 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Q3U6N9 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC11.82□□□□□ -0.52
Q3U6N9 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Q3U6N9 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Q3U6N9 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Q3U6N9 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Q3U6N9 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Q3U6N9 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Q3U6N9 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Q3U6N9 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Q3U6N9 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Q3U6N9 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Q3U6N9 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Q3U6N9 Gm45871-202ENSMUST00000209969 1368 ntTSL 5 BASIC11.81□□□□□ -0.52
Q3U6N9 Pnp2-201ENSMUST00000095925 1372 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Q3U6N9 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC11.81□□□□□ -0.52
Q3U6N9 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Q3U6N9 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Q3U6N9 Kars-201ENSMUST00000034426 2008 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Q3U6N9 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Q3U6N9 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Q3U6N9 Sirt2-209ENSMUST00000170068 1585 ntTSL 5 BASIC11.81□□□□□ -0.52
Q3U6N9 Wdr31-201ENSMUST00000030087 1440 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Q3U6N9 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Q3U6N9 Ighg2c-201ENSMUST00000103416 1214 ntAPPRIS P5 BASIC11.81□□□□□ -0.52
Q3U6N9 Gm23912-201ENSMUST00000104687 87 ntBASIC11.81□□□□□ -0.52
Q3U6N9 Zfp36l1-ps-201ENSMUST00000118349 899 ntBASIC11.81□□□□□ -0.52
Q3U6N9 Got2-ps1-201ENSMUST00000121655 1293 ntBASIC11.81□□□□□ -0.52
Q3U6N9 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC11.81□□□□□ -0.52
Q3U6N9 Ankrd29-202ENSMUST00000122408 850 ntTSL 5 BASIC11.81□□□□□ -0.52
Q3U6N9 3110056K07Rik-202ENSMUST00000136690 1063 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Q3U6N9 Tmem74bos-201ENSMUST00000137422 390 ntTSL 3 BASIC11.81□□□□□ -0.52
Q3U6N9 Gm17099-201ENSMUST00000166780 412 ntTSL 3 BASIC11.81□□□□□ -0.52
Q3U6N9 4930448A20Rik-201ENSMUST00000205988 1034 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Q3U6N9 5330413P13Rik-205ENSMUST00000210961 913 ntTSL 5 BASIC11.81□□□□□ -0.52
Q3U6N9 Gm21027-201ENSMUST00000219300 1236 ntBASIC11.81□□□□□ -0.52
Q3U6N9 Rpl17-ps3-201ENSMUST00000221295 556 ntBASIC11.81□□□□□ -0.52
Q3U6N9 Net1-206ENSMUST00000222504 447 ntTSL 3 BASIC11.81□□□□□ -0.52
Q3U6N9 Gm5455-201ENSMUST00000058710 715 ntBASIC11.81□□□□□ -0.52
Q3U6N9 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Q3U6N9 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Q3U6N9 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Q3U6N9 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Q3U6N9 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Q3U6N9 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC11.81□□□□□ -0.52
Q3U6N9 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Q3U6N9 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Q3U6N9 Styxl1-208ENSMUST00000178515 1651 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Q3U6N9 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Q3U6N9 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Q3U6N9 Mfsd13b-201ENSMUST00000033166 1883 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Q3U6N9 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC11.8□□□□□ -0.52
Q3U6N9 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Q3U6N9 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Q3U6N9 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Q3U6N9 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Q3U6N9 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 53.6 ms