Protein–RNA interactions for Protein: Q3TCX3

Khdc4, KH homology domain-containing protein 4, mousemouse

Predictions only

Length 612 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Khdc4Q3TCX3 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Khdc4Q3TCX3 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Khdc4Q3TCX3 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Khdc4Q3TCX3 E230029C05Rik-205ENSMUST00000208362 2444 ntTSL 2 BASIC11.87□□□□□ -0.51
Khdc4Q3TCX3 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC11.87□□□□□ -0.51
Khdc4Q3TCX3 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Khdc4Q3TCX3 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Khdc4Q3TCX3 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Khdc4Q3TCX3 Gm24830-201ENSMUST00000102024 166 ntBASIC11.87□□□□□ -0.51
Khdc4Q3TCX3 Snord83b-201ENSMUST00000104546 94 ntBASIC11.87□□□□□ -0.51
Khdc4Q3TCX3 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Khdc4Q3TCX3 Gm13442-201ENSMUST00000135749 663 ntTSL 3 BASIC11.87□□□□□ -0.51
Khdc4Q3TCX3 Ly6g6c-201ENSMUST00000173207 598 ntAPPRIS ALT2 TSL 3 BASIC11.87□□□□□ -0.51
Khdc4Q3TCX3 Ly6g6c-202ENSMUST00000173478 962 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Khdc4Q3TCX3 Gm25890-201ENSMUST00000177643 165 ntBASIC11.87□□□□□ -0.51
Khdc4Q3TCX3 Rnu1b2-201ENSMUST00000178073 165 ntBASIC11.87□□□□□ -0.51
Khdc4Q3TCX3 Rnu1b1-201ENSMUST00000178250 165 ntBASIC11.87□□□□□ -0.51
Khdc4Q3TCX3 Gm22614-201ENSMUST00000178300 165 ntBASIC11.87□□□□□ -0.51
Khdc4Q3TCX3 Gm26973-201ENSMUST00000182105 696 ntTSL 3 BASIC11.87□□□□□ -0.51
Khdc4Q3TCX3 Gm27246-201ENSMUST00000183611 1240 ntTSL 5 BASIC11.87□□□□□ -0.51
Khdc4Q3TCX3 Mir7070-201ENSMUST00000183657 86 ntBASIC11.87□□□□□ -0.51
Khdc4Q3TCX3 Gsdmcl-ps-204ENSMUST00000191285 637 ntTSL 3 BASIC11.87□□□□□ -0.51
Khdc4Q3TCX3 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC11.87□□□□□ -0.51
Khdc4Q3TCX3 AC155637.1-201ENSMUST00000218560 636 ntBASIC11.87□□□□□ -0.51
Khdc4Q3TCX3 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Khdc4Q3TCX3 Fmr1nb-202ENSMUST00000071848 842 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Khdc4Q3TCX3 Gm22042-201ENSMUST00000082989 165 ntBASIC11.87□□□□□ -0.51
Khdc4Q3TCX3 Gm26232-201ENSMUST00000083360 166 ntBASIC11.87□□□□□ -0.51
Khdc4Q3TCX3 Gm24136-201ENSMUST00000083374 165 ntBASIC11.87□□□□□ -0.51
Khdc4Q3TCX3 Rnu1b6-201ENSMUST00000083839 166 ntBASIC11.87□□□□□ -0.51
Khdc4Q3TCX3 Gm26110-201ENSMUST00000083971 165 ntBASIC11.87□□□□□ -0.51
Khdc4Q3TCX3 Mbnl2-204ENSMUST00000227012 2390 ntBASIC11.87□□□□□ -0.51
Khdc4Q3TCX3 Olfr649-202ENSMUST00000106859 1382 ntAPPRIS P1 TSL 3 BASIC11.87□□□□□ -0.51
Khdc4Q3TCX3 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Khdc4Q3TCX3 Tex10-201ENSMUST00000030030 3102 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Khdc4Q3TCX3 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Khdc4Q3TCX3 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Khdc4Q3TCX3 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Khdc4Q3TCX3 Nek3-201ENSMUST00000033865 2021 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Khdc4Q3TCX3 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Khdc4Q3TCX3 AC113441.2-201ENSMUST00000221538 1468 ntBASIC11.87□□□□□ -0.51
Khdc4Q3TCX3 Gm10782-202ENSMUST00000223775 1480 ntBASIC11.87□□□□□ -0.51
Khdc4Q3TCX3 Dhx58os-201ENSMUST00000137154 1594 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Khdc4Q3TCX3 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Khdc4Q3TCX3 Pxn-214ENSMUST00000212819 1689 ntTSL 5 BASIC11.87□□□□□ -0.51
Khdc4Q3TCX3 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC11.87□□□□□ -0.51
Khdc4Q3TCX3 Dstyk-201ENSMUST00000045110 6282 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Khdc4Q3TCX3 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Khdc4Q3TCX3 Tmem186-201ENSMUST00000052505 2736 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Khdc4Q3TCX3 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Khdc4Q3TCX3 Lgr5-201ENSMUST00000020350 4714 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Khdc4Q3TCX3 AC241621.2-201ENSMUST00000223991 2151 ntBASIC11.86□□□□□ -0.51
Khdc4Q3TCX3 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Khdc4Q3TCX3 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Khdc4Q3TCX3 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC11.86□□□□□ -0.51
Khdc4Q3TCX3 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Khdc4Q3TCX3 Gm36500-201ENSMUST00000221821 1626 ntTSL 5 BASIC11.86□□□□□ -0.51
Khdc4Q3TCX3 Gm45743-201ENSMUST00000212701 2795 ntBASIC11.86□□□□□ -0.51
Khdc4Q3TCX3 Tbc1d2-201ENSMUST00000084621 4315 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Khdc4Q3TCX3 Sp4-201ENSMUST00000026367 5694 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Khdc4Q3TCX3 Slc33a1-201ENSMUST00000029402 3150 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Khdc4Q3TCX3 Cacna1c-212ENSMUST00000187940 7507 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Khdc4Q3TCX3 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
Khdc4Q3TCX3 AC125108.1-201ENSMUST00000218986 2330 ntBASIC11.86□□□□□ -0.51
Khdc4Q3TCX3 Gabpb1-206ENSMUST00000110425 4153 ntAPPRIS ALT1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Khdc4Q3TCX3 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Khdc4Q3TCX3 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Khdc4Q3TCX3 Pcdhgb2-202ENSMUST00000195112 4661 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Khdc4Q3TCX3 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC11.86□□□□□ -0.51
Khdc4Q3TCX3 Gm14809-201ENSMUST00000152025 695 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Khdc4Q3TCX3 Gm26636-201ENSMUST00000181696 1115 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Khdc4Q3TCX3 Gm2546-201ENSMUST00000182630 991 ntBASIC11.86□□□□□ -0.51
Khdc4Q3TCX3 Gm4691-202ENSMUST00000182989 885 ntTSL 5 BASIC11.86□□□□□ -0.51
Khdc4Q3TCX3 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC11.86□□□□□ -0.51
Khdc4Q3TCX3 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Khdc4Q3TCX3 Calca-204ENSMUST00000205714 416 ntTSL 2 BASIC11.86□□□□□ -0.51
Khdc4Q3TCX3 Fam168a-206ENSMUST00000208013 1129 ntTSL 5 BASIC11.86□□□□□ -0.51
Khdc4Q3TCX3 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC11.86□□□□□ -0.51
Khdc4Q3TCX3 Gm40437-201ENSMUST00000222338 767 ntTSL 5 BASIC11.86□□□□□ -0.51
Khdc4Q3TCX3 Fam96a-201ENSMUST00000034945 1240 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Khdc4Q3TCX3 Cyb5d1-201ENSMUST00000051620 753 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Khdc4Q3TCX3 1700029I15Rik-201ENSMUST00000054316 364 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Khdc4Q3TCX3 Mtus2-202ENSMUST00000085554 1009 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Khdc4Q3TCX3 Efemp2-209ENSMUST00000167371 1382 ntTSL 5 BASIC11.86□□□□□ -0.51
Khdc4Q3TCX3 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC11.86□□□□□ -0.51
Khdc4Q3TCX3 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Khdc4Q3TCX3 Gm38385-201ENSMUST00000194454 2351 ntBASIC11.86□□□□□ -0.51
Khdc4Q3TCX3 Gm43677-201ENSMUST00000198098 2378 ntBASIC11.86□□□□□ -0.51
Khdc4Q3TCX3 Gm28323-201ENSMUST00000186817 2499 ntBASIC11.86□□□□□ -0.51
Khdc4Q3TCX3 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Khdc4Q3TCX3 Hltf-201ENSMUST00000002502 4955 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Khdc4Q3TCX3 Kndc1-201ENSMUST00000053445 7299 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Khdc4Q3TCX3 Spryd7-201ENSMUST00000022497 4002 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Khdc4Q3TCX3 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Khdc4Q3TCX3 Ttbk2-202ENSMUST00000057135 11066 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Khdc4Q3TCX3 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Khdc4Q3TCX3 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC11.86□□□□□ -0.51
Khdc4Q3TCX3 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC11.86□□□□□ -0.51
Khdc4Q3TCX3 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Khdc4Q3TCX3 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 35.1 ms