Protein–RNA interactions for Protein: Q3SXD3

Hddc2, HD domain-containing protein 2, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hddc2Q3SXD3 Rims1-206ENSMUST00000115273 6107 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
Hddc2Q3SXD3 Tjp1-201ENSMUST00000032729 6102 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Hddc2Q3SXD3 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Hddc2Q3SXD3 Ugt1a10-201ENSMUST00000113142 2244 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Hddc2Q3SXD3 Asb8-204ENSMUST00000143400 2226 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Hddc2Q3SXD3 Flicr-201ENSMUST00000144719 3455 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Hddc2Q3SXD3 Cxcl12-203ENSMUST00000112871 3132 ntAPPRIS P4 TSL 1 (best) BASIC11.55□□□□□ -0.56
Hddc2Q3SXD3 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC11.55□□□□□ -0.56
Hddc2Q3SXD3 Mob4-205ENSMUST00000162364 2840 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Hddc2Q3SXD3 Zfp235-201ENSMUST00000056549 3373 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Hddc2Q3SXD3 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Hddc2Q3SXD3 Gm37613-201ENSMUST00000195677 3580 ntBASIC11.54□□□□□ -0.56
Hddc2Q3SXD3 Sash3-201ENSMUST00000033427 2677 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Hddc2Q3SXD3 Slc10a6-201ENSMUST00000031263 2124 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Hddc2Q3SXD3 Myocd-203ENSMUST00000108695 5114 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Hddc2Q3SXD3 Gm21103-202ENSMUST00000170923 1761 ntAPPRIS P5 TSL 5 BASIC11.54□□□□□ -0.56
Hddc2Q3SXD3 Osgin1-201ENSMUST00000098365 1959 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Hddc2Q3SXD3 Armc1-201ENSMUST00000029125 3673 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Hddc2Q3SXD3 Mark3-208ENSMUST00000221753 2394 ntTSL 5 BASIC11.54□□□□□ -0.56
Hddc2Q3SXD3 Zfp108-202ENSMUST00000205982 2577 ntAPPRIS P2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Hddc2Q3SXD3 Rab14-202ENSMUST00000113025 4346 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Hddc2Q3SXD3 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Hddc2Q3SXD3 Nfx1-203ENSMUST00000098143 4594 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Hddc2Q3SXD3 Gm38292-201ENSMUST00000192646 3045 ntBASIC11.54□□□□□ -0.56
Hddc2Q3SXD3 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC11.54□□□□□ -0.56
Hddc2Q3SXD3 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Hddc2Q3SXD3 Gm6415-201ENSMUST00000118488 348 ntBASIC11.54□□□□□ -0.56
Hddc2Q3SXD3 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC11.54□□□□□ -0.56
Hddc2Q3SXD3 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC11.54□□□□□ -0.56
Hddc2Q3SXD3 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC11.54□□□□□ -0.56
Hddc2Q3SXD3 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC11.54□□□□□ -0.56
Hddc2Q3SXD3 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC11.54□□□□□ -0.56
Hddc2Q3SXD3 Gm3436-201ENSMUST00000179930 840 ntBASIC11.54□□□□□ -0.56
Hddc2Q3SXD3 Gm46209-201ENSMUST00000217912 553 ntBASIC11.54□□□□□ -0.56
Hddc2Q3SXD3 Gm8227-201ENSMUST00000223306 571 ntBASIC11.54□□□□□ -0.56
Hddc2Q3SXD3 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Hddc2Q3SXD3 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Hddc2Q3SXD3 Npas2-201ENSMUST00000056815 4236 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Hddc2Q3SXD3 Patl1-201ENSMUST00000061618 4221 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Hddc2Q3SXD3 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Hddc2Q3SXD3 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Hddc2Q3SXD3 Dlk1-201ENSMUST00000056110 4653 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Hddc2Q3SXD3 Nuak2-201ENSMUST00000072177 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Hddc2Q3SXD3 Aoc2-201ENSMUST00000041095 2543 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Hddc2Q3SXD3 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Hddc2Q3SXD3 Fn1-214ENSMUST00000188894 8043 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Hddc2Q3SXD3 Tbc1d17-201ENSMUST00000047085 8750 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Hddc2Q3SXD3 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Hddc2Q3SXD3 4933406M09Rik-201ENSMUST00000162187 1768 ntAPPRIS P1 TSL 2 BASIC11.54□□□□□ -0.56
Hddc2Q3SXD3 Coa5-201ENSMUST00000027286 3863 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Hddc2Q3SXD3 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Hddc2Q3SXD3 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC11.54□□□□□ -0.56
Hddc2Q3SXD3 Gm9025-201ENSMUST00000122415 1575 ntBASIC11.54□□□□□ -0.56
Hddc2Q3SXD3 AC113060.1-201ENSMUST00000225689 1573 ntBASIC11.54□□□□□ -0.56
Hddc2Q3SXD3 Pou2f3-201ENSMUST00000034513 2610 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Hddc2Q3SXD3 Ccl22-201ENSMUST00000034231 2216 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Hddc2Q3SXD3 Kirrel3-209ENSMUST00000190549 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Hddc2Q3SXD3 Vmn1r45-201ENSMUST00000054202 3341 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Hddc2Q3SXD3 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Hddc2Q3SXD3 Grip1-216ENSMUST00000154238 2482 ntTSL 5 BASIC11.53□□□□□ -0.56
Hddc2Q3SXD3 Ctsc-201ENSMUST00000032779 2493 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Hddc2Q3SXD3 Calhm2-201ENSMUST00000035822 2458 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Hddc2Q3SXD3 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC11.53□□□□□ -0.56
Hddc2Q3SXD3 Mafb-201ENSMUST00000099126 3363 ntAPPRIS P1 BASIC11.53□□□□□ -0.56
Hddc2Q3SXD3 L1cam-202ENSMUST00000102871 5113 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Hddc2Q3SXD3 4930463O16Rik-201ENSMUST00000020222 2088 ntTSL 2 BASIC11.53□□□□□ -0.56
Hddc2Q3SXD3 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
Hddc2Q3SXD3 Ntng2-202ENSMUST00000071201 1881 ntTSL 5 BASIC11.53□□□□□ -0.56
Hddc2Q3SXD3 Eif2s1-201ENSMUST00000071230 3405 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Hddc2Q3SXD3 Mtmr11-201ENSMUST00000054356 2778 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Hddc2Q3SXD3 Ces2d-ps-201ENSMUST00000043209 1656 ntBASIC11.53□□□□□ -0.56
Hddc2Q3SXD3 Madd-213ENSMUST00000111376 5927 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
Hddc2Q3SXD3 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Hddc2Q3SXD3 AU019823-201ENSMUST00000131351 3316 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Hddc2Q3SXD3 AU019823-205ENSMUST00000171462 3339 ntAPPRIS P1 TSL 3 BASIC11.53□□□□□ -0.56
Hddc2Q3SXD3 Paqr5-201ENSMUST00000034817 3566 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Hddc2Q3SXD3 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC11.53□□□□□ -0.56
Hddc2Q3SXD3 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC11.53□□□□□ -0.56
Hddc2Q3SXD3 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Hddc2Q3SXD3 Gm9630-201ENSMUST00000178304 885 ntBASIC11.53□□□□□ -0.56
Hddc2Q3SXD3 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC11.53□□□□□ -0.56
Hddc2Q3SXD3 Gm27622-201ENSMUST00000183779 60 ntBASIC11.53□□□□□ -0.56
Hddc2Q3SXD3 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC11.53□□□□□ -0.56
Hddc2Q3SXD3 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC11.53□□□□□ -0.56
Hddc2Q3SXD3 Gm44771-201ENSMUST00000206975 626 ntBASIC11.53□□□□□ -0.56
Hddc2Q3SXD3 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC11.53□□□□□ -0.56
Hddc2Q3SXD3 AC140397.2-201ENSMUST00000224213 834 ntBASIC11.53□□□□□ -0.56
Hddc2Q3SXD3 Shd-206ENSMUST00000225145 998 ntBASIC11.53□□□□□ -0.56
Hddc2Q3SXD3 AC154621.1-201ENSMUST00000226155 1119 ntBASIC11.53□□□□□ -0.56
Hddc2Q3SXD3 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC11.53□□□□□ -0.56
Hddc2Q3SXD3 Dync1i1-202ENSMUST00000115555 2669 ntAPPRIS ALT1 TSL 5 BASIC11.53□□□□□ -0.56
Hddc2Q3SXD3 Pif1-203ENSMUST00000134538 3395 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Hddc2Q3SXD3 Map4-214ENSMUST00000199498 4055 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Hddc2Q3SXD3 Pdzk1-203ENSMUST00000107070 2711 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Hddc2Q3SXD3 Htr2c-202ENSMUST00000096299 4883 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Hddc2Q3SXD3 Fam110b-201ENSMUST00000054857 3210 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Hddc2Q3SXD3 Adamts13-201ENSMUST00000014996 3474 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Hddc2Q3SXD3 Lef1-201ENSMUST00000029611 3482 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Hddc2Q3SXD3 Hsd3b6-201ENSMUST00000029463 1802 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Hddc2Q3SXD3 Vcan-202ENSMUST00000109544 5702 ntTSL 5 BASIC11.53□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 50.5 ms