Protein–RNA interactions for Protein: Q09XV5

Chd8, Chromodomain-helicase-DNA-binding protein 8, mousemouse

Known RBP Predictions only

Length 2,582 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd8Q09XV5 Mir598-201ENSMUST00000102094 79 ntBASIC11.09□□□□□ -0.63
Chd8Q09XV5 Sh2d1a-203ENSMUST00000115070 782 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Chd8Q09XV5 Rfc4-203ENSMUST00000115338 1279 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Chd8Q09XV5 Rps18-ps1-201ENSMUST00000120838 459 ntBASIC11.09□□□□□ -0.63
Chd8Q09XV5 Dnmt3l-203ENSMUST00000131825 1113 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Chd8Q09XV5 Dnmt3l-206ENSMUST00000139539 1279 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Chd8Q09XV5 Polr3c-205ENSMUST00000141377 808 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Chd8Q09XV5 2810433D01Rik-202ENSMUST00000154798 1045 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Chd8Q09XV5 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Chd8Q09XV5 Gm20400-201ENSMUST00000173695 665 ntTSL 3 BASIC11.09□□□□□ -0.63
Chd8Q09XV5 Tcl1-204ENSMUST00000176579 760 ntTSL 2 BASIC11.09□□□□□ -0.63
Chd8Q09XV5 Gm26982-201ENSMUST00000182250 1151 ntBASIC11.09□□□□□ -0.63
Chd8Q09XV5 Gm27241-202ENSMUST00000185013 570 ntTSL 2 BASIC11.09□□□□□ -0.63
Chd8Q09XV5 Gm37638-201ENSMUST00000194337 1123 ntBASIC11.09□□□□□ -0.63
Chd8Q09XV5 Tpi-rs4-201ENSMUST00000213734 720 ntBASIC11.09□□□□□ -0.63
Chd8Q09XV5 AC169511.1-201ENSMUST00000227639 995 ntBASIC11.09□□□□□ -0.63
Chd8Q09XV5 Crygf-201ENSMUST00000027082 627 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Chd8Q09XV5 Krtap2-4-201ENSMUST00000074926 828 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
Chd8Q09XV5 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Chd8Q09XV5 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Chd8Q09XV5 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC11.09□□□□□ -0.63
Chd8Q09XV5 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.63
Chd8Q09XV5 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.63
Chd8Q09XV5 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.63
Chd8Q09XV5 C130050O18Rik-202ENSMUST00000163940 1618 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Chd8Q09XV5 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC11.08□□□□□ -0.64
Chd8Q09XV5 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Chd8Q09XV5 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
Chd8Q09XV5 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Chd8Q09XV5 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Chd8Q09XV5 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC11.08□□□□□ -0.64
Chd8Q09XV5 Gm28719-201ENSMUST00000187779 1757 ntBASIC11.08□□□□□ -0.64
Chd8Q09XV5 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC11.08□□□□□ -0.64
Chd8Q09XV5 Wsb2-202ENSMUST00000111959 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Chd8Q09XV5 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Chd8Q09XV5 Atp6v1c2-202ENSMUST00000095820 1549 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Chd8Q09XV5 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Chd8Q09XV5 Gm25562-201ENSMUST00000104608 133 ntBASIC11.08□□□□□ -0.64
Chd8Q09XV5 Gm11191-201ENSMUST00000117231 610 ntBASIC11.08□□□□□ -0.64
Chd8Q09XV5 Gm14921-201ENSMUST00000118643 908 ntBASIC11.08□□□□□ -0.64
Chd8Q09XV5 Rptoros-201ENSMUST00000127450 1174 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Chd8Q09XV5 Gm11683-201ENSMUST00000147006 918 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Chd8Q09XV5 Gm8226-201ENSMUST00000190511 798 ntBASIC11.08□□□□□ -0.64
Chd8Q09XV5 AC124613.1-201ENSMUST00000198711 88 ntBASIC11.08□□□□□ -0.64
Chd8Q09XV5 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC11.08□□□□□ -0.64
Chd8Q09XV5 CT571245.2-201ENSMUST00000218421 305 ntBASIC11.08□□□□□ -0.64
Chd8Q09XV5 AC154477.1-201ENSMUST00000226515 773 ntBASIC11.08□□□□□ -0.64
Chd8Q09XV5 AC137842.2-201ENSMUST00000227734 797 ntBASIC11.08□□□□□ -0.64
Chd8Q09XV5 Gm4978-201ENSMUST00000071565 801 ntBASIC11.08□□□□□ -0.64
Chd8Q09XV5 Gm45012-201ENSMUST00000208323 1666 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Chd8Q09XV5 Gm29771-201ENSMUST00000193142 1423 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Chd8Q09XV5 Gm4900-201ENSMUST00000222046 1628 ntBASIC11.08□□□□□ -0.64
Chd8Q09XV5 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Chd8Q09XV5 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC11.08□□□□□ -0.64
Chd8Q09XV5 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC11.08□□□□□ -0.64
Chd8Q09XV5 Cfap61-201ENSMUST00000116398 1561 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Chd8Q09XV5 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Chd8Q09XV5 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Chd8Q09XV5 Apol9a-202ENSMUST00000089452 1527 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Chd8Q09XV5 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Chd8Q09XV5 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
Chd8Q09XV5 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Chd8Q09XV5 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Chd8Q09XV5 Ighv14-3-201ENSMUST00000103469 399 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
Chd8Q09XV5 Gm23272-201ENSMUST00000104053 129 ntBASIC11.08□□□□□ -0.64
Chd8Q09XV5 Gm12461-201ENSMUST00000120231 1239 ntBASIC11.08□□□□□ -0.64
Chd8Q09XV5 C1qtnf7-202ENSMUST00000121872 1283 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Chd8Q09XV5 Gm16048-201ENSMUST00000134250 663 ntTSL 3 BASIC11.08□□□□□ -0.64
Chd8Q09XV5 Gm12406-201ENSMUST00000155382 697 ntTSL 3 BASIC11.08□□□□□ -0.64
Chd8Q09XV5 Gm38297-201ENSMUST00000195122 1057 ntBASIC11.08□□□□□ -0.64
Chd8Q09XV5 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Chd8Q09XV5 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Chd8Q09XV5 Klf11-201ENSMUST00000020982 4086 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Chd8Q09XV5 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Chd8Q09XV5 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Chd8Q09XV5 C030034I22Rik-202ENSMUST00000188481 4231 ntBASIC11.08□□□□□ -0.64
Chd8Q09XV5 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Chd8Q09XV5 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC11.08□□□□□ -0.64
Chd8Q09XV5 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Chd8Q09XV5 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Chd8Q09XV5 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC11.07□□□□□ -0.64
Chd8Q09XV5 Gm20052-201ENSMUST00000200831 1525 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Chd8Q09XV5 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Chd8Q09XV5 Gatb-202ENSMUST00000107672 1820 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Chd8Q09XV5 Psmc3-201ENSMUST00000002171 1819 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Chd8Q09XV5 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Chd8Q09XV5 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Chd8Q09XV5 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Chd8Q09XV5 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Chd8Q09XV5 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Chd8Q09XV5 Gm23912-201ENSMUST00000104687 87 ntBASIC11.07□□□□□ -0.64
Chd8Q09XV5 Pex5l-203ENSMUST00000108221 1187 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Chd8Q09XV5 Fas-202ENSMUST00000112472 555 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Chd8Q09XV5 Nup188-202ENSMUST00000113634 534 ntTSL 2 BASIC11.07□□□□□ -0.64
Chd8Q09XV5 Ptgds-203ENSMUST00000114259 775 ntAPPRIS P1 TSL 2 BASIC11.07□□□□□ -0.64
Chd8Q09XV5 Gm13315-201ENSMUST00000120376 991 ntBASIC11.07□□□□□ -0.64
Chd8Q09XV5 Gm13166-201ENSMUST00000123828 940 ntTSL 5 BASIC11.07□□□□□ -0.64
Chd8Q09XV5 Gm13530-201ENSMUST00000134014 390 ntTSL 2 BASIC11.07□□□□□ -0.64
Chd8Q09XV5 Gm13236-201ENSMUST00000153010 940 ntTSL 5 BASIC11.07□□□□□ -0.64
Chd8Q09XV5 1110059E24Rik-205ENSMUST00000178523 629 ntTSL 3 BASIC11.07□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 34.2 ms