Protein–RNA interactions for Protein: Q06831

Sox4, Transcription factor SOX-4, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox4Q06831 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Sox4Q06831 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Sox4Q06831 Tsku-202ENSMUST00000164726 2620 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
Sox4Q06831 Gm8862-201ENSMUST00000198379 1346 ntBASIC12.25□□□□□ -0.45
Sox4Q06831 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Sox4Q06831 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Sox4Q06831 Gm45342-201ENSMUST00000210903 1363 ntBASIC12.25□□□□□ -0.45
Sox4Q06831 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC12.25□□□□□ -0.45
Sox4Q06831 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Sox4Q06831 Aldoa-203ENSMUST00000106348 1460 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Sox4Q06831 Gm18227-201ENSMUST00000211082 1468 ntBASIC12.25□□□□□ -0.45
Sox4Q06831 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Sox4Q06831 Mtus2-203ENSMUST00000085558 7543 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Sox4Q06831 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Sox4Q06831 Gm9951-202ENSMUST00000149618 1772 ntTSL 2 BASIC12.25□□□□□ -0.45
Sox4Q06831 Tktl2-201ENSMUST00000002025 2021 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Sox4Q06831 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Sox4Q06831 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Sox4Q06831 Gm45266-201ENSMUST00000210111 2173 ntBASIC12.25□□□□□ -0.45
Sox4Q06831 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Sox4Q06831 Gm43721-201ENSMUST00000199677 2313 ntBASIC12.25□□□□□ -0.45
Sox4Q06831 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Sox4Q06831 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Sox4Q06831 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Sox4Q06831 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Sox4Q06831 Wisp1-201ENSMUST00000005255 5097 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Sox4Q06831 Mynn-202ENSMUST00000192715 5555 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Sox4Q06831 Abcc5-202ENSMUST00000079158 5811 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Sox4Q06831 Kif16b-201ENSMUST00000043589 6383 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
Sox4Q06831 Cacnb4-206ENSMUST00000178799 7981 ntTSL 5 BASIC12.24□□□□□ -0.45
Sox4Q06831 Ifna7-201ENSMUST00000105143 573 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Sox4Q06831 Duoxa1-202ENSMUST00000110537 1506 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Sox4Q06831 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Sox4Q06831 Sgsm1-203ENSMUST00000112324 1102 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Sox4Q06831 Gm15547-201ENSMUST00000122152 333 ntBASIC12.24□□□□□ -0.45
Sox4Q06831 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC12.24□□□□□ -0.45
Sox4Q06831 Rps19-ps11-201ENSMUST00000160308 433 ntBASIC12.24□□□□□ -0.45
Sox4Q06831 Tmbim6-206ENSMUST00000161250 1148 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Sox4Q06831 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Sox4Q06831 Gm17376-201ENSMUST00000166016 84 ntBASIC12.24□□□□□ -0.45
Sox4Q06831 Gm20482-202ENSMUST00000174729 825 ntBASIC12.24□□□□□ -0.45
Sox4Q06831 Gm27320-201ENSMUST00000184892 109 ntBASIC12.24□□□□□ -0.45
Sox4Q06831 Gm28882-201ENSMUST00000185504 314 ntBASIC12.24□□□□□ -0.45
Sox4Q06831 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Sox4Q06831 Gm39318-201ENSMUST00000214606 1118 ntTSL 3 BASIC12.24□□□□□ -0.45
Sox4Q06831 Mfsd13b-205ENSMUST00000216241 1761 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Sox4Q06831 Tkfc-201ENSMUST00000037678 2253 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Sox4Q06831 Zfp384-202ENSMUST00000054553 2451 ntTSL 5 BASIC12.24□□□□□ -0.45
Sox4Q06831 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Sox4Q06831 Ccdc70-202ENSMUST00000070649 961 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Sox4Q06831 Fmr1nb-202ENSMUST00000071848 842 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Sox4Q06831 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Sox4Q06831 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Sox4Q06831 Rgs12-201ENSMUST00000030984 5472 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Sox4Q06831 Gm35339-201ENSMUST00000208833 5090 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Sox4Q06831 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Sox4Q06831 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Sox4Q06831 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Sox4Q06831 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Sox4Q06831 Plk2-201ENSMUST00000022212 2800 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Sox4Q06831 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Sox4Q06831 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC12.23□□□□□ -0.45
Sox4Q06831 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Sox4Q06831 Ermard-202ENSMUST00000061688 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Sox4Q06831 Kif5a-201ENSMUST00000099172 6295 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Sox4Q06831 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Sox4Q06831 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Sox4Q06831 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Sox4Q06831 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Sox4Q06831 Drg2-201ENSMUST00000018568 1788 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Sox4Q06831 Mtus1-202ENSMUST00000059115 6548 ntTSL 5 BASIC12.23□□□□□ -0.45
Sox4Q06831 Rbl1-201ENSMUST00000029170 4862 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Sox4Q06831 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Sox4Q06831 Gm5884-201ENSMUST00000036712 1479 ntBASIC12.23□□□□□ -0.45
Sox4Q06831 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC12.23□□□□□ -0.45
Sox4Q06831 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC12.23□□□□□ -0.45
Sox4Q06831 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC12.23□□□□□ -0.45
Sox4Q06831 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Sox4Q06831 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Sox4Q06831 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Sox4Q06831 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Sox4Q06831 Tmod4-202ENSMUST00000107227 1260 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Sox4Q06831 Cdc26-202ENSMUST00000107459 654 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
Sox4Q06831 Pla2g10-202ENSMUST00000115807 964 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Sox4Q06831 Gm9083-201ENSMUST00000120423 819 ntBASIC12.23□□□□□ -0.45
Sox4Q06831 Gm14832-201ENSMUST00000121289 322 ntBASIC12.23□□□□□ -0.45
Sox4Q06831 Igf1-206ENSMUST00000122100 651 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Sox4Q06831 Pdlim2-205ENSMUST00000129174 729 ntTSL 2 BASIC12.23□□□□□ -0.45
Sox4Q06831 1700040D17Rik-201ENSMUST00000181305 998 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Sox4Q06831 Gm2420-203ENSMUST00000202748 447 ntTSL 5 BASIC12.23□□□□□ -0.45
Sox4Q06831 Gm38979-201ENSMUST00000207099 698 ntTSL 3 BASIC12.23□□□□□ -0.45
Sox4Q06831 Hspb2-202ENSMUST00000217159 552 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Sox4Q06831 Gm8712-201ENSMUST00000221090 701 ntBASIC12.23□□□□□ -0.45
Sox4Q06831 Rnf7-201ENSMUST00000057500 1232 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Sox4Q06831 Pjvk-201ENSMUST00000099986 1219 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Sox4Q06831 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Sox4Q06831 Rbm20-204ENSMUST00000164202 6592 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Sox4Q06831 AC126262.1-201ENSMUST00000221802 1904 ntBASIC12.23□□□□□ -0.45
Sox4Q06831 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Sox4Q06831 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 32.7 ms