Protein–RNA interactions for Protein: P97313

Prkdc, DNA-dependent protein kinase catalytic subunit, mousemouse

Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrkdcP97313 CT009527.1-201ENSMUST00000224205 339 ntBASIC8.18□□□□□ -1.1
PrkdcP97313 Krtap4-1-201ENSMUST00000081007 1015 ntAPPRIS P1 BASIC8.18□□□□□ -1.1
PrkdcP97313 Olfr1335-201ENSMUST00000084313 1148 ntAPPRIS ALT2 BASIC8.18□□□□□ -1.1
PrkdcP97313 Mok-203ENSMUST00000084974 1132 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
PrkdcP97313 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
PrkdcP97313 Ccndbp1-202ENSMUST00000099488 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC8.18□□□□□ -1.1
PrkdcP97313 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
PrkdcP97313 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
PrkdcP97313 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
PrkdcP97313 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC8.18□□□□□ -1.1
PrkdcP97313 1110059E24Rik-201ENSMUST00000038830 1614 ntAPPRIS P2 TSL 1 (best) BASIC8.18□□□□□ -1.1
PrkdcP97313 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC8.18□□□□□ -1.1
PrkdcP97313 Gsg1-202ENSMUST00000111909 1087 ntAPPRIS ALT2 TSL 5 BASIC8.18□□□□□ -1.1
PrkdcP97313 Eif5a-212ENSMUST00000153652 840 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
PrkdcP97313 Gm17207-201ENSMUST00000168686 645 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
PrkdcP97313 Gm6612-201ENSMUST00000170777 395 ntBASIC8.18□□□□□ -1.1
PrkdcP97313 Gm17931-201ENSMUST00000208132 634 ntBASIC8.18□□□□□ -1.1
PrkdcP97313 Gm5650-201ENSMUST00000209641 598 ntBASIC8.18□□□□□ -1.1
PrkdcP97313 4930546C10Rik-201ENSMUST00000025428 363 ntAPPRIS P1 TSL 5 BASIC8.18□□□□□ -1.1
PrkdcP97313 Klk1b24-201ENSMUST00000073713 878 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
PrkdcP97313 Klk1b21-201ENSMUST00000085455 871 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
PrkdcP97313 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC8.18□□□□□ -1.1
PrkdcP97313 Pou3f4-201ENSMUST00000078229 2928 ntAPPRIS P1 BASIC8.18□□□□□ -1.1
PrkdcP97313 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC8.18□□□□□ -1.1
PrkdcP97313 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
PrkdcP97313 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC8.18□□□□□ -1.1
PrkdcP97313 Gm43167-201ENSMUST00000202001 1606 ntBASIC8.18□□□□□ -1.1
PrkdcP97313 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
PrkdcP97313 Hyal3-202ENSMUST00000148440 1380 ntAPPRIS P1 TSL 5 BASIC8.18□□□□□ -1.1
PrkdcP97313 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
PrkdcP97313 Riox2-206ENSMUST00000160571 2244 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
PrkdcP97313 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC8.18□□□□□ -1.1
PrkdcP97313 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC8.18□□□□□ -1.1
PrkdcP97313 Kcne3-202ENSMUST00000170954 1315 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
PrkdcP97313 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC8.18□□□□□ -1.1
PrkdcP97313 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
PrkdcP97313 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
PrkdcP97313 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
PrkdcP97313 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
PrkdcP97313 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
PrkdcP97313 Ptgds-203ENSMUST00000114259 775 ntAPPRIS P1 TSL 2 BASIC8.18□□□□□ -1.1
PrkdcP97313 Gm16217-201ENSMUST00000124182 616 ntTSL 3 BASIC8.18□□□□□ -1.1
PrkdcP97313 Nr5a1os-201ENSMUST00000146954 926 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
PrkdcP97313 Gm17936-201ENSMUST00000199413 988 ntBASIC8.18□□□□□ -1.1
PrkdcP97313 Ctrl-201ENSMUST00000034368 879 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
PrkdcP97313 Rpl9-201ENSMUST00000057885 738 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
PrkdcP97313 Iah1-201ENSMUST00000076813 1141 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
PrkdcP97313 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
PrkdcP97313 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC8.18□□□□□ -1.1
PrkdcP97313 Alas2-202ENSMUST00000112715 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC8.18□□□□□ -1.1
PrkdcP97313 Spag6-201ENSMUST00000095132 2458 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
PrkdcP97313 Retreg1-206ENSMUST00000228306 1430 ntBASIC8.18□□□□□ -1.1
PrkdcP97313 Mphosph10-201ENSMUST00000032735 2248 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
PrkdcP97313 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC8.18□□□□□ -1.1
PrkdcP97313 Taf6-202ENSMUST00000110936 2308 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
PrkdcP97313 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC8.18□□□□□ -1.1
PrkdcP97313 Copz1-201ENSMUST00000100162 1669 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
PrkdcP97313 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
PrkdcP97313 Gm11996-201ENSMUST00000117538 915 ntBASIC8.18□□□□□ -1.1
PrkdcP97313 Gm15615-201ENSMUST00000118876 198 ntBASIC8.18□□□□□ -1.1
PrkdcP97313 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC8.18□□□□□ -1.1
PrkdcP97313 Kif4-ps-202ENSMUST00000185083 652 ntBASIC8.18□□□□□ -1.1
PrkdcP97313 Krtap19-5-201ENSMUST00000053460 483 ntAPPRIS P1 BASIC8.18□□□□□ -1.1
PrkdcP97313 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC8.18□□□□□ -1.1
PrkdcP97313 Nanos2-201ENSMUST00000063563 1563 ntAPPRIS P1 BASIC8.17□□□□□ -1.1
PrkdcP97313 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC8.17□□□□□ -1.1
PrkdcP97313 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
PrkdcP97313 Zfp125-201ENSMUST00000079237 2488 ntBASIC8.17□□□□□ -1.1
PrkdcP97313 Hbs1l-201ENSMUST00000020153 2793 ntAPPRIS ALT2 TSL 1 (best) BASIC8.17□□□□□ -1.1
PrkdcP97313 Pdzk1ip1-202ENSMUST00000106548 887 ntAPPRIS P3 TSL 1 (best) BASIC8.17□□□□□ -1.1
PrkdcP97313 Cat-202ENSMUST00000111168 779 ntTSL 3 BASIC8.17□□□□□ -1.1
PrkdcP97313 Cd79b-202ENSMUST00000167143 1195 ntAPPRIS P2 TSL 1 (best) BASIC8.17□□□□□ -1.1
PrkdcP97313 Gm10807-201ENSMUST00000177134 795 ntBASIC8.17□□□□□ -1.1
PrkdcP97313 Gm26626-201ENSMUST00000180989 713 ntTSL 2 BASIC8.17□□□□□ -1.1
PrkdcP97313 Gm18010-201ENSMUST00000203553 202 ntBASIC8.17□□□□□ -1.1
PrkdcP97313 Gm44934-201ENSMUST00000208941 238 ntTSL 5 BASIC8.17□□□□□ -1.1
PrkdcP97313 AC154826.1-201ENSMUST00000217369 498 ntTSL 5 BASIC8.17□□□□□ -1.1
PrkdcP97313 Ngp-201ENSMUST00000035061 1222 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
PrkdcP97313 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC8.17□□□□□ -1.1
PrkdcP97313 Psg23-201ENSMUST00000057810 2179 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
PrkdcP97313 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
PrkdcP97313 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC8.17□□□□□ -1.1
PrkdcP97313 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC8.17□□□□□ -1.1
PrkdcP97313 Ripk3-202ENSMUST00000168716 1964 ntTSL 5 BASIC8.17□□□□□ -1.1
PrkdcP97313 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
PrkdcP97313 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
PrkdcP97313 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC8.17□□□□□ -1.1
PrkdcP97313 Rpl22-204ENSMUST00000139685 2051 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
PrkdcP97313 Eno1-201ENSMUST00000080149 1902 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
PrkdcP97313 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
PrkdcP97313 Mdh1b-201ENSMUST00000114094 1719 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
PrkdcP97313 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
PrkdcP97313 Nrxn1-215ENSMUST00000173917 1439 ntTSL 2 BASIC8.17□□□□□ -1.1
PrkdcP97313 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC8.17□□□□□ -1.1
PrkdcP97313 Tnnt3-213ENSMUST00000105952 1040 ntAPPRIS ALT2 TSL 1 (best) BASIC8.17□□□□□ -1.1
PrkdcP97313 Tnnt3-215ENSMUST00000105954 1052 ntAPPRIS ALT2 TSL 1 (best) BASIC8.17□□□□□ -1.1
PrkdcP97313 Tnnt3-216ENSMUST00000105955 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC8.17□□□□□ -1.1
PrkdcP97313 Tnnt3-218ENSMUST00000105958 1050 ntAPPRIS ALT2 TSL 1 (best) BASIC8.17□□□□□ -1.1
PrkdcP97313 Trmt10b-202ENSMUST00000107800 983 ntAPPRIS ALT2 TSL 5 BASIC8.17□□□□□ -1.1
PrkdcP97313 Gm25569-201ENSMUST00000157175 131 ntBASIC8.17□□□□□ -1.1
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms