Protein–RNA interactions for Protein: P82349

Sgcb, Beta-sarcoglycan, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcbP82349 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
SgcbP82349 Ugt1a2-201ENSMUST00000049289 2211 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
SgcbP82349 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC11.13□□□□□ -0.63
SgcbP82349 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC11.13□□□□□ -0.63
SgcbP82349 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
SgcbP82349 Gm4366-201ENSMUST00000201488 1342 ntBASIC11.13□□□□□ -0.63
SgcbP82349 AC154262.2-202ENSMUST00000225158 1331 ntBASIC11.13□□□□□ -0.63
SgcbP82349 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
SgcbP82349 Nup210-201ENSMUST00000032179 7037 ntAPPRIS P2 TSL 1 (best) BASIC11.13□□□□□ -0.63
SgcbP82349 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
SgcbP82349 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
SgcbP82349 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
SgcbP82349 Farsb-202ENSMUST00000170217 2036 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
SgcbP82349 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
SgcbP82349 Fgd5-202ENSMUST00000113466 5621 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
SgcbP82349 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
SgcbP82349 Rangap1-202ENSMUST00000170134 3002 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
SgcbP82349 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC11.13□□□□□ -0.63
SgcbP82349 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC11.13□□□□□ -0.63
SgcbP82349 Pdxk-201ENSMUST00000041616 5124 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
SgcbP82349 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC11.13□□□□□ -0.63
SgcbP82349 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
SgcbP82349 Defa-ps4-201ENSMUST00000118021 183 ntBASIC11.13□□□□□ -0.63
SgcbP82349 Gm13736-201ENSMUST00000119272 253 ntBASIC11.13□□□□□ -0.63
SgcbP82349 Acyp1-204ENSMUST00000121930 634 ntTSL 2 BASIC11.13□□□□□ -0.63
SgcbP82349 Gm14381-201ENSMUST00000122105 414 ntBASIC11.13□□□□□ -0.63
SgcbP82349 Smim5-201ENSMUST00000131566 700 ntTSL 2 BASIC11.13□□□□□ -0.63
SgcbP82349 Timm10b-208ENSMUST00000151193 1083 ntTSL 2 BASIC11.13□□□□□ -0.63
SgcbP82349 Gng2-205ENSMUST00000161247 419 ntAPPRIS P1 TSL 3 BASIC11.13□□□□□ -0.63
SgcbP82349 Hspb9-201ENSMUST00000017976 652 ntAPPRIS ALT2 BASIC11.13□□□□□ -0.63
SgcbP82349 Gm26618-201ENSMUST00000181123 497 ntTSL 2 BASIC11.13□□□□□ -0.63
SgcbP82349 Mir8109-201ENSMUST00000184375 117 ntBASIC11.13□□□□□ -0.63
SgcbP82349 Gm38341-201ENSMUST00000195357 515 ntBASIC11.13□□□□□ -0.63
SgcbP82349 Rpl7a-ps2-201ENSMUST00000200554 774 ntBASIC11.13□□□□□ -0.63
SgcbP82349 1110006O24Rik-201ENSMUST00000201728 768 ntBASIC11.13□□□□□ -0.63
SgcbP82349 4933436H12Rik-201ENSMUST00000207304 658 ntTSL 5 BASIC11.13□□□□□ -0.63
SgcbP82349 Gm45865-201ENSMUST00000211815 945 ntBASIC11.13□□□□□ -0.63
SgcbP82349 AC112680.3-201ENSMUST00000215297 488 ntTSL 3 BASIC11.13□□□□□ -0.63
SgcbP82349 AC154171.1-201ENSMUST00000224610 643 ntBASIC11.13□□□□□ -0.63
SgcbP82349 Gm3402-201ENSMUST00000036715 981 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
SgcbP82349 Zdhhc12-201ENSMUST00000081838 1187 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
SgcbP82349 Gm6502-202ENSMUST00000097478 1218 ntTSL 5 BASIC11.13□□□□□ -0.63
SgcbP82349 Stim1-202ENSMUST00000209255 4362 ntTSL 5 BASIC11.13□□□□□ -0.63
SgcbP82349 Numa1-201ENSMUST00000084852 7180 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
SgcbP82349 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC11.13□□□□□ -0.63
SgcbP82349 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
SgcbP82349 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
SgcbP82349 Tbc1d2-201ENSMUST00000084621 4315 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
SgcbP82349 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC11.13□□□□□ -0.63
SgcbP82349 Gm9947-201ENSMUST00000067599 2920 ntBASIC11.13□□□□□ -0.63
SgcbP82349 Cnmd-203ENSMUST00000165835 1362 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
SgcbP82349 Zfp609-201ENSMUST00000159109 7777 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
SgcbP82349 Me3-202ENSMUST00000032856 4485 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
SgcbP82349 Gm37737-201ENSMUST00000195013 1638 ntBASIC11.13□□□□□ -0.63
SgcbP82349 Rac1-201ENSMUST00000080537 4159 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
SgcbP82349 Cds2-201ENSMUST00000089461 8073 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
SgcbP82349 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC11.12□□□□□ -0.63
SgcbP82349 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
SgcbP82349 Adh6a-202ENSMUST00000106247 1341 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
SgcbP82349 Myh10-204ENSMUST00000108673 1315 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
SgcbP82349 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
SgcbP82349 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
SgcbP82349 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
SgcbP82349 Ankrd35-201ENSMUST00000048427 4052 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
SgcbP82349 Skp2-203ENSMUST00000190131 1819 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
SgcbP82349 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
SgcbP82349 Zfyve1-203ENSMUST00000221919 4420 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
SgcbP82349 Sin3a-206ENSMUST00000168177 5086 ntAPPRIS ALT1 TSL 1 (best) BASIC11.12□□□□□ -0.63
SgcbP82349 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
SgcbP82349 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
SgcbP82349 Retreg1-206ENSMUST00000228306 1430 ntBASIC11.12□□□□□ -0.63
SgcbP82349 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
SgcbP82349 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
SgcbP82349 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
SgcbP82349 Arid4a-201ENSMUST00000046305 4998 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
SgcbP82349 Gstt1-202ENSMUST00000120177 1105 ntTSL 2 BASIC11.12□□□□□ -0.63
SgcbP82349 Gm11964-201ENSMUST00000120982 444 ntBASIC11.12□□□□□ -0.63
SgcbP82349 Rbm3-ps-201ENSMUST00000121422 465 ntBASIC11.12□□□□□ -0.63
SgcbP82349 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC11.12□□□□□ -0.63
SgcbP82349 2310047D07Rik-201ENSMUST00000189493 735 ntTSL 3 BASIC11.12□□□□□ -0.63
SgcbP82349 Gm30285-201ENSMUST00000214614 422 ntBASIC11.12□□□□□ -0.63
SgcbP82349 AC166095.1-201ENSMUST00000223731 1241 ntBASIC11.12□□□□□ -0.63
SgcbP82349 CT025533.2-201ENSMUST00000228715 1248 ntBASIC11.12□□□□□ -0.63
SgcbP82349 Morn3-201ENSMUST00000031437 1128 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
SgcbP82349 9430041J12Rik-201ENSMUST00000050989 534 ntBASIC11.12□□□□□ -0.63
SgcbP82349 Tfpi2-201ENSMUST00000031674 1530 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
SgcbP82349 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC11.12□□□□□ -0.63
SgcbP82349 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
SgcbP82349 Tmem266-202ENSMUST00000085754 4417 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
SgcbP82349 Cant1-206ENSMUST00000164927 1379 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
SgcbP82349 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC11.12□□□□□ -0.63
SgcbP82349 Zkscan3-207ENSMUST00000223831 2101 ntBASIC11.12□□□□□ -0.63
SgcbP82349 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
SgcbP82349 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
SgcbP82349 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
SgcbP82349 Mier1-205ENSMUST00000106858 4830 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
SgcbP82349 Gm8617-201ENSMUST00000118796 2222 ntBASIC11.12□□□□□ -0.63
SgcbP82349 Maml2-202ENSMUST00000159294 6404 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
SgcbP82349 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
SgcbP82349 2210406O10Rik-202ENSMUST00000122882 1743 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 52.5 ms