Protein–RNA interactions for Protein: P70354

Msx3, Homeobox protein MSX-3, mousemouse

Predictions only

Length 204 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msx3P70354 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Msx3P70354 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Msx3P70354 Gnb4-205ENSMUST00000155737 5997 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Msx3P70354 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Msx3P70354 Anxa8-201ENSMUST00000022519 1880 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Msx3P70354 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Msx3P70354 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Msx3P70354 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Msx3P70354 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC12.78□□□□□ -0.36
Msx3P70354 Lmln-201ENSMUST00000023497 6147 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Msx3P70354 Ttc23-202ENSMUST00000107470 1915 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Msx3P70354 Trpv6-203ENSMUST00000201471 2304 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Msx3P70354 Col14a1-202ENSMUST00000110217 6457 ntAPPRIS ALT1 TSL 5 BASIC12.78□□□□□ -0.36
Msx3P70354 Mylk-201ENSMUST00000023538 7824 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Msx3P70354 Arid4a-201ENSMUST00000046305 4998 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Msx3P70354 Tbc1d1-204ENSMUST00000121370 5419 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Msx3P70354 Asrgl1-201ENSMUST00000049948 4195 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Msx3P70354 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Msx3P70354 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Msx3P70354 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Msx3P70354 Gm15824-201ENSMUST00000119516 955 ntBASIC12.78□□□□□ -0.36
Msx3P70354 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Msx3P70354 4833427G06Rik-201ENSMUST00000170947 973 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Msx3P70354 AC153974.2-201ENSMUST00000218577 1025 ntBASIC12.78□□□□□ -0.36
Msx3P70354 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Msx3P70354 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Msx3P70354 Cox7a2-201ENSMUST00000034881 659 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Msx3P70354 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Msx3P70354 Slc39a9-204ENSMUST00000217889 2155 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Msx3P70354 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Msx3P70354 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC12.78□□□□□ -0.36
Msx3P70354 Lrrfip2-214ENSMUST00000217117 1363 ntTSL 5 BASIC12.78□□□□□ -0.36
Msx3P70354 Cyp2j13-203ENSMUST00000107078 1493 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Msx3P70354 B230398E01Rik-201ENSMUST00000125186 1958 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Msx3P70354 Plcb2-206ENSMUST00000159756 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Msx3P70354 Arid5a-203ENSMUST00000115031 3002 ntTSL 2 BASIC12.78□□□□□ -0.36
Msx3P70354 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Msx3P70354 Gm26905-201ENSMUST00000180798 6621 ntTSL 5 BASIC12.78□□□□□ -0.36
Msx3P70354 Pcp4l1-201ENSMUST00000111332 1577 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Msx3P70354 Nrg1-206ENSMUST00000208205 2645 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.36
Msx3P70354 Ptpn1-201ENSMUST00000029053 4213 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Msx3P70354 Asxl1-205ENSMUST00000227428 6981 ntAPPRIS ALT2 BASIC12.77□□□□□ -0.36
Msx3P70354 A730071L15Rik-201ENSMUST00000181545 1615 ntAPPRIS P1 BASIC12.77□□□□□ -0.36
Msx3P70354 Tgm1-201ENSMUST00000002389 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Msx3P70354 Pbxip1-201ENSMUST00000038942 4479 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Msx3P70354 Cacnb2-203ENSMUST00000114723 3945 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Msx3P70354 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Msx3P70354 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Msx3P70354 Tlr9-201ENSMUST00000062241 3478 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Msx3P70354 Spata33-202ENSMUST00000212161 2941 ntTSL 2 BASIC12.77□□□□□ -0.36
Msx3P70354 Gm44831-201ENSMUST00000208469 2989 ntBASIC12.77□□□□□ -0.36
Msx3P70354 Arhgap12-211ENSMUST00000182383 2500 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Msx3P70354 Gm9083-201ENSMUST00000120423 819 ntBASIC12.77□□□□□ -0.37
Msx3P70354 Gm13342-201ENSMUST00000121055 207 ntBASIC12.77□□□□□ -0.37
Msx3P70354 Gm25261-201ENSMUST00000157416 134 ntBASIC12.77□□□□□ -0.37
Msx3P70354 Gm45184-201ENSMUST00000206354 955 ntTSL 5 BASIC12.77□□□□□ -0.37
Msx3P70354 Ceacam1-209ENSMUST00000206687 1061 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Msx3P70354 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Msx3P70354 Gm42890-202ENSMUST00000167642 2566 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Msx3P70354 Kdm2b-202ENSMUST00000046073 5180 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Msx3P70354 Trappc9-204ENSMUST00000170633 4688 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Msx3P70354 Dbf4-204ENSMUST00000168500 2000 ntTSL 5 BASIC12.77□□□□□ -0.37
Msx3P70354 Egfl6-201ENSMUST00000000412 2704 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Msx3P70354 Kdm2b-203ENSMUST00000086200 4999 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Msx3P70354 Fetub-203ENSMUST00000167399 1421 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Msx3P70354 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Msx3P70354 Nol4l-202ENSMUST00000109784 5610 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Msx3P70354 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
Msx3P70354 Cdh7-202ENSMUST00000112701 4945 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Msx3P70354 Pole2-201ENSMUST00000021359 1706 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Msx3P70354 Acvrl1-205ENSMUST00000120754 3506 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Msx3P70354 Gm9195-201ENSMUST00000208955 8870 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Msx3P70354 Tmem201-202ENSMUST00000103208 3620 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Msx3P70354 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Msx3P70354 Tmem237-202ENSMUST00000094917 1869 ntAPPRIS P4 TSL 1 (best) BASIC12.76□□□□□ -0.37
Msx3P70354 Snx6-201ENSMUST00000005798 1928 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Msx3P70354 Nupl1-206ENSMUST00000225111 2936 ntBASIC12.76□□□□□ -0.37
Msx3P70354 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Msx3P70354 Grm5-202ENSMUST00000125009 8047 ntAPPRIS P3 TSL 5 BASIC12.76□□□□□ -0.37
Msx3P70354 Tcf25-203ENSMUST00000211932 5002 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Msx3P70354 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Msx3P70354 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Msx3P70354 Pde4d-201ENSMUST00000074103 2167 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Msx3P70354 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Msx3P70354 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC12.76□□□□□ -0.37
Msx3P70354 Adcyap1r1-201ENSMUST00000070736 3695 ntAPPRIS P4 TSL 1 (best) BASIC12.76□□□□□ -0.37
Msx3P70354 Entpd5-203ENSMUST00000110272 4972 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Msx3P70354 Tmem268-201ENSMUST00000077709 3765 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Msx3P70354 Wfdc9-202ENSMUST00000109335 547 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Msx3P70354 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
Msx3P70354 Cabp5-202ENSMUST00000117400 1258 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Msx3P70354 Gm14209-201ENSMUST00000154946 462 ntTSL 5 BASIC12.76□□□□□ -0.37
Msx3P70354 Gm4034-201ENSMUST00000187674 480 ntBASIC12.76□□□□□ -0.37
Msx3P70354 Gm28380-201ENSMUST00000188800 385 ntTSL 5 BASIC12.76□□□□□ -0.37
Msx3P70354 Rpl7a-ps2-201ENSMUST00000200554 774 ntBASIC12.76□□□□□ -0.37
Msx3P70354 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC12.76□□□□□ -0.37
Msx3P70354 Gm44958-201ENSMUST00000203734 736 ntBASIC12.76□□□□□ -0.37
Msx3P70354 Gm45437-201ENSMUST00000209998 448 ntTSL 3 BASIC12.76□□□□□ -0.37
Msx3P70354 AC130829.1-201ENSMUST00000221548 494 ntBASIC12.76□□□□□ -0.37
Msx3P70354 AC125209.1-201ENSMUST00000225812 766 ntBASIC12.76□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 52.7 ms