Protein–RNA interactions for Protein: P63058

Thra, Thyroid hormone receptor alpha, mousemouse

Predictions only

Length 492 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ThraP63058 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
ThraP63058 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC12.63□□□□□ -0.39
ThraP63058 Spata33-202ENSMUST00000212161 2941 ntTSL 2 BASIC12.63□□□□□ -0.39
ThraP63058 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC12.63□□□□□ -0.39
ThraP63058 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
ThraP63058 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
ThraP63058 Etf1-201ENSMUST00000025218 3709 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
ThraP63058 Fgd3-203ENSMUST00000110087 4698 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
ThraP63058 Gm4986-201ENSMUST00000119731 549 ntBASIC12.63□□□□□ -0.39
ThraP63058 Gm12539-201ENSMUST00000121549 1098 ntBASIC12.63□□□□□ -0.39
ThraP63058 Mogat1-201ENSMUST00000012331 1178 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
ThraP63058 Gm15501-201ENSMUST00000133910 849 ntTSL 3 BASIC12.63□□□□□ -0.39
ThraP63058 Hnf4aos-203ENSMUST00000141329 839 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
ThraP63058 Gm16302-201ENSMUST00000159268 428 ntTSL 3 BASIC12.63□□□□□ -0.39
ThraP63058 Mospd4-201ENSMUST00000180618 576 ntBASIC12.63□□□□□ -0.39
ThraP63058 Gm28085-201ENSMUST00000189281 1137 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
ThraP63058 Gm37489-201ENSMUST00000191883 159 ntBASIC12.63□□□□□ -0.39
ThraP63058 Gm37042-201ENSMUST00000193816 581 ntBASIC12.63□□□□□ -0.39
ThraP63058 Stambp-ps1-201ENSMUST00000209280 1208 ntBASIC12.63□□□□□ -0.39
ThraP63058 Gm45881-201ENSMUST00000210659 517 ntTSL 5 BASIC12.63□□□□□ -0.39
ThraP63058 Gm5781-201ENSMUST00000219792 443 ntBASIC12.63□□□□□ -0.39
ThraP63058 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC12.63□□□□□ -0.39
ThraP63058 Cant1-206ENSMUST00000164927 1379 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
ThraP63058 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
ThraP63058 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
ThraP63058 Myo18a-210ENSMUST00000130305 5450 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
ThraP63058 Gm27177-202ENSMUST00000183514 2703 ntBASIC12.63□□□□□ -0.39
ThraP63058 Pcnx-201ENSMUST00000021567 12139 ntAPPRIS P2 TSL 2 BASIC12.63□□□□□ -0.39
ThraP63058 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
ThraP63058 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
ThraP63058 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
ThraP63058 Wdfy2-201ENSMUST00000014691 6646 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
ThraP63058 Crat-201ENSMUST00000028207 3833 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
ThraP63058 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
ThraP63058 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
ThraP63058 Foxl2os-201ENSMUST00000181706 3095 ntTSL 2 BASIC12.63□□□□□ -0.39
ThraP63058 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
ThraP63058 Mast1-201ENSMUST00000109741 4872 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
ThraP63058 Gm36500-201ENSMUST00000221821 1626 ntTSL 5 BASIC12.62□□□□□ -0.39
ThraP63058 Kdm2b-202ENSMUST00000046073 5180 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
ThraP63058 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
ThraP63058 Runx1-201ENSMUST00000023673 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
ThraP63058 Arhgap35-202ENSMUST00000171937 6251 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
ThraP63058 Cacna1c-201ENSMUST00000075591 7584 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
ThraP63058 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC12.62□□□□□ -0.39
ThraP63058 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
ThraP63058 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
ThraP63058 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC12.62□□□□□ -0.39
ThraP63058 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
ThraP63058 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
ThraP63058 Mgat1-203ENSMUST00000109194 2480 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
ThraP63058 Zfp384-202ENSMUST00000054553 2451 ntTSL 5 BASIC12.62□□□□□ -0.39
ThraP63058 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
ThraP63058 Ocln-203ENSMUST00000159459 1950 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
ThraP63058 Ascc1-202ENSMUST00000164083 1473 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
ThraP63058 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
ThraP63058 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
ThraP63058 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC12.62□□□□□ -0.39
ThraP63058 Gm11978-201ENSMUST00000122315 466 ntBASIC12.62□□□□□ -0.39
ThraP63058 1700030C14Rik-201ENSMUST00000139912 756 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
ThraP63058 Gm7008-202ENSMUST00000170019 402 ntTSL 2 BASIC12.62□□□□□ -0.39
ThraP63058 Gm20404-201ENSMUST00000174032 621 ntTSL 3 BASIC12.62□□□□□ -0.39
ThraP63058 Cdk3-ps-202ENSMUST00000174177 915 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
ThraP63058 Tex9-206ENSMUST00000183574 1264 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
ThraP63058 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
ThraP63058 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC12.62□□□□□ -0.39
ThraP63058 Gm7118-201ENSMUST00000200167 1003 ntBASIC12.62□□□□□ -0.39
ThraP63058 AC152453.1-201ENSMUST00000218802 1254 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
ThraP63058 AC154305.4-201ENSMUST00000224520 614 ntBASIC12.62□□□□□ -0.39
ThraP63058 CT485787.1-201ENSMUST00000225617 968 ntBASIC12.62□□□□□ -0.39
ThraP63058 Saa3-201ENSMUST00000006956 555 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
ThraP63058 Myo18a-220ENSMUST00000164334 5381 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
ThraP63058 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
ThraP63058 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
ThraP63058 Kcna10-201ENSMUST00000055064 1913 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
ThraP63058 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
ThraP63058 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
ThraP63058 Reln-207ENSMUST00000161356 11699 ntAPPRIS P3 TSL 5 BASIC12.62□□□□□ -0.39
ThraP63058 Plpbp-201ENSMUST00000033875 3603 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
ThraP63058 Rbm10-202ENSMUST00000082089 2562 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
ThraP63058 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
ThraP63058 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
ThraP63058 Fam234b-202ENSMUST00000111916 2927 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
ThraP63058 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
ThraP63058 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
ThraP63058 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
ThraP63058 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
ThraP63058 Fam60a-201ENSMUST00000054080 2697 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
ThraP63058 Gm6210-201ENSMUST00000204734 1942 ntBASIC12.61□□□□□ -0.39
ThraP63058 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
ThraP63058 Oprd1-201ENSMUST00000056336 4021 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
ThraP63058 St6galnac4-204ENSMUST00000179989 2826 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
ThraP63058 Gm22323-201ENSMUST00000103832 109 ntBASIC12.61□□□□□ -0.39
ThraP63058 Inca1-203ENSMUST00000108542 1080 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
ThraP63058 Pin4-201ENSMUST00000113627 489 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
ThraP63058 2310057J18Rik-201ENSMUST00000015663 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
ThraP63058 Gm24548-201ENSMUST00000158650 108 ntBASIC12.61□□□□□ -0.39
ThraP63058 Gm18584-201ENSMUST00000203098 964 ntBASIC12.61□□□□□ -0.39
ThraP63058 Gm6458-201ENSMUST00000211573 635 ntBASIC12.61□□□□□ -0.39
ThraP63058 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 46.4 ms