Protein–RNA interactions for Protein: P54285

Cacnb3, Voltage-dependent L-type calcium channel subunit beta-3, mousemouse

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacnb3P54285 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cacnb3P54285 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cacnb3P54285 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
Cacnb3P54285 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cacnb3P54285 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cacnb3P54285 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Cacnb3P54285 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cacnb3P54285 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cacnb3P54285 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cacnb3P54285 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Cacnb3P54285 Pmp2-201ENSMUST00000029034 1408 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cacnb3P54285 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cacnb3P54285 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cacnb3P54285 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Cacnb3P54285 Gm5847-201ENSMUST00000178959 1595 ntBASIC14.47□□□□□ -0.09
Cacnb3P54285 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cacnb3P54285 B430119L08Rik-201ENSMUST00000130054 1994 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Cacnb3P54285 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cacnb3P54285 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cacnb3P54285 Sparc-209ENSMUST00000216313 1304 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Cacnb3P54285 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Cacnb3P54285 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cacnb3P54285 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC14.47□□□□□ -0.09
Cacnb3P54285 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Cacnb3P54285 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cacnb3P54285 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Cacnb3P54285 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cacnb3P54285 Dnmt3l-202ENSMUST00000123940 1452 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Cacnb3P54285 Gm23596-201ENSMUST00000104304 132 ntBASIC14.47□□□□□ -0.09
Cacnb3P54285 Cd300ld2-202ENSMUST00000106578 918 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Cacnb3P54285 Mdk-ps1-201ENSMUST00000119782 321 ntBASIC14.47□□□□□ -0.09
Cacnb3P54285 Gm7722-201ENSMUST00000120646 741 ntBASIC14.47□□□□□ -0.09
Cacnb3P54285 Gm42791-202ENSMUST00000147473 727 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Cacnb3P54285 Gng13-202ENSMUST00000172002 719 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cacnb3P54285 9330159M07Rik-202ENSMUST00000180783 1044 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Cacnb3P54285 1110008E08Rik-202ENSMUST00000183621 723 ntBASIC14.47□□□□□ -0.09
Cacnb3P54285 4930589O11Rik-201ENSMUST00000200768 920 ntBASIC14.47□□□□□ -0.09
Cacnb3P54285 Gm34728-201ENSMUST00000201510 414 ntTSL 3 BASIC14.47□□□□□ -0.09
Cacnb3P54285 AC125486.1-201ENSMUST00000218701 320 ntBASIC14.47□□□□□ -0.09
Cacnb3P54285 Gm270-201ENSMUST00000223010 976 ntBASIC14.47□□□□□ -0.09
Cacnb3P54285 Ankrd7-201ENSMUST00000031489 1190 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cacnb3P54285 Cmtm2b-201ENSMUST00000041973 880 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cacnb3P54285 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC14.47□□□□□ -0.09
Cacnb3P54285 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cacnb3P54285 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cacnb3P54285 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Cacnb3P54285 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Cacnb3P54285 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Cacnb3P54285 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cacnb3P54285 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cacnb3P54285 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC14.46□□□□□ -0.09
Cacnb3P54285 Lrrfip2-213ENSMUST00000216430 1525 ntTSL 5 BASIC14.46□□□□□ -0.09
Cacnb3P54285 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC14.46□□□□□ -0.09
Cacnb3P54285 Slc7a3-201ENSMUST00000073927 2232 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cacnb3P54285 Tectb-202ENSMUST00000120936 1349 ntTSL 5 BASIC14.46□□□□□ -0.09
Cacnb3P54285 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cacnb3P54285 Dcaf4-201ENSMUST00000021645 2008 ntAPPRIS P2 TSL 5 BASIC14.46□□□□□ -0.09
Cacnb3P54285 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC14.46□□□□□ -0.09
Cacnb3P54285 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Cacnb3P54285 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Cacnb3P54285 Lbr-201ENSMUST00000005003 3510 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cacnb3P54285 Skap1-206ENSMUST00000107663 742 ntTSL 3 BASIC14.46□□□□□ -0.09
Cacnb3P54285 Gm15131-201ENSMUST00000119124 595 ntBASIC14.46□□□□□ -0.09
Cacnb3P54285 3110045C21Rik-201ENSMUST00000180638 1135 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Cacnb3P54285 Gm5733-201ENSMUST00000190232 939 ntBASIC14.46□□□□□ -0.09
Cacnb3P54285 Gm28694-201ENSMUST00000190681 722 ntTSL 3 BASIC14.46□□□□□ -0.09
Cacnb3P54285 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC14.46□□□□□ -0.09
Cacnb3P54285 Gm8285-201ENSMUST00000208293 759 ntBASIC14.46□□□□□ -0.09
Cacnb3P54285 Lysmd4-208ENSMUST00000208698 551 ntAPPRIS ALT2 TSL 2 BASIC14.46□□□□□ -0.09
Cacnb3P54285 Gm45799-208ENSMUST00000211054 490 ntAPPRIS P2 TSL 3 BASIC14.46□□□□□ -0.09
Cacnb3P54285 Mt3-202ENSMUST00000211915 440 ntTSL 3 BASIC14.46□□□□□ -0.09
Cacnb3P54285 Cct2-206ENSMUST00000219573 637 ntTSL 3 BASIC14.46□□□□□ -0.09
Cacnb3P54285 Gm40983-201ENSMUST00000222524 502 ntTSL 3 BASIC14.46□□□□□ -0.09
Cacnb3P54285 Csnk2b-201ENSMUST00000025246 961 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cacnb3P54285 Lcn8-201ENSMUST00000038482 651 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cacnb3P54285 Mlf1-201ENSMUST00000061322 1113 ntAPPRIS P4 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cacnb3P54285 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
Cacnb3P54285 Taf6-203ENSMUST00000110937 2093 ntTSL 5 BASIC14.46□□□□□ -0.09
Cacnb3P54285 Ccndbp1-201ENSMUST00000060455 1569 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cacnb3P54285 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
Cacnb3P54285 Ccr4-202ENSMUST00000215425 1382 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Cacnb3P54285 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Cacnb3P54285 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Cacnb3P54285 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cacnb3P54285 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
Cacnb3P54285 Hmg20a-204ENSMUST00000214869 1782 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Cacnb3P54285 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Cacnb3P54285 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cacnb3P54285 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cacnb3P54285 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cacnb3P54285 Vamp5-202ENSMUST00000101285 623 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cacnb3P54285 Pcgf2-203ENSMUST00000103149 817 ntTSL 5 BASIC14.45□□□□□ -0.1
Cacnb3P54285 Gm7851-201ENSMUST00000117574 323 ntBASIC14.45□□□□□ -0.1
Cacnb3P54285 Gm11667-201ENSMUST00000119828 486 ntBASIC14.45□□□□□ -0.1
Cacnb3P54285 Gm8566-201ENSMUST00000120174 465 ntBASIC14.45□□□□□ -0.1
Cacnb3P54285 Gm12196-201ENSMUST00000120954 262 ntBASIC14.45□□□□□ -0.1
Cacnb3P54285 Gm14760-201ENSMUST00000121831 999 ntBASIC14.45□□□□□ -0.1
Cacnb3P54285 Gm15906-201ENSMUST00000124746 323 ntTSL 5 BASIC14.45□□□□□ -0.1
Cacnb3P54285 Gm53-203ENSMUST00000143887 757 ntTSL 3 BASIC14.45□□□□□ -0.1
Cacnb3P54285 1700121N20Rik-201ENSMUST00000167922 1027 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 40.5 ms