Protein–RNA interactions for Protein: P54276

Msh6, DNA mismatch repair protein Msh6, mousemouse

Known RBP Predictions only

Length 1,358 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh6P54276 Gm16195-201ENSMUST00000130607 442 ntTSL 2 BASIC15.68■□□□□ 0.1
Msh6P54276 Gm53-203ENSMUST00000143887 757 ntTSL 3 BASIC15.68■□□□□ 0.1
Msh6P54276 Aamdc-213ENSMUST00000154853 883 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Msh6P54276 Atp10d-206ENSMUST00000169617 761 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Msh6P54276 Gm21859-201ENSMUST00000178424 1045 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Msh6P54276 1110008E08Rik-202ENSMUST00000183621 723 ntBASIC15.68■□□□□ 0.1
Msh6P54276 Gm5733-201ENSMUST00000190232 939 ntBASIC15.68■□□□□ 0.1
Msh6P54276 Sox2ot-217ENSMUST00000200414 710 ntTSL 3 BASIC15.68■□□□□ 0.1
Msh6P54276 Gm45550-201ENSMUST00000209380 946 ntBASIC15.68■□□□□ 0.1
Msh6P54276 C330004P14Rik-201ENSMUST00000218833 628 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Msh6P54276 Gm40983-201ENSMUST00000222524 502 ntTSL 3 BASIC15.68■□□□□ 0.1
Msh6P54276 Cmtm2b-201ENSMUST00000041973 880 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Msh6P54276 Mrps34-201ENSMUST00000043907 918 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Msh6P54276 Prm3-201ENSMUST00000050864 410 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
Msh6P54276 4930523C07Rik-202ENSMUST00000097513 300 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
Msh6P54276 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Msh6P54276 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Msh6P54276 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Msh6P54276 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Msh6P54276 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Msh6P54276 Dnmt3l-202ENSMUST00000123940 1452 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Msh6P54276 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Msh6P54276 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Msh6P54276 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Msh6P54276 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Msh6P54276 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Msh6P54276 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Msh6P54276 Bbs5-202ENSMUST00000112286 1397 ntTSL 5 BASIC15.67■□□□□ 0.1
Msh6P54276 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Msh6P54276 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Msh6P54276 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Msh6P54276 Hmg20a-204ENSMUST00000214869 1782 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Msh6P54276 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Msh6P54276 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Msh6P54276 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC15.67■□□□□ 0.1
Msh6P54276 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Msh6P54276 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Msh6P54276 Timm10b-204ENSMUST00000106784 494 ntTSL 3 BASIC15.67■□□□□ 0.1
Msh6P54276 Rpsa-ps4-201ENSMUST00000121691 888 ntBASIC15.67■□□□□ 0.1
Msh6P54276 Rps2-ps4-201ENSMUST00000121977 633 ntBASIC15.67■□□□□ 0.1
Msh6P54276 Gm15906-201ENSMUST00000124746 323 ntTSL 5 BASIC15.67■□□□□ 0.1
Msh6P54276 Gm15881-201ENSMUST00000148792 942 ntBASIC15.67■□□□□ 0.1
Msh6P54276 Scgb1b19-201ENSMUST00000165813 418 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Msh6P54276 Scgb1b3-201ENSMUST00000179481 419 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Msh6P54276 Mir7677-201ENSMUST00000184226 67 ntBASIC15.67■□□□□ 0.1
Msh6P54276 Qdpr-209ENSMUST00000198258 1172 ntTSL 5 BASIC15.67■□□□□ 0.1
Msh6P54276 Gm42682-201ENSMUST00000198349 1265 ntBASIC15.67■□□□□ 0.1
Msh6P54276 Gm34728-201ENSMUST00000201510 414 ntTSL 3 BASIC15.67■□□□□ 0.1
Msh6P54276 Calca-205ENSMUST00000205933 458 ntTSL 3 BASIC15.67■□□□□ 0.1
Msh6P54276 Tepp-207ENSMUST00000212056 613 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Msh6P54276 Gm4797-201ENSMUST00000219075 1283 ntBASIC15.67■□□□□ 0.1
Msh6P54276 Neil1-201ENSMUST00000034842 1170 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Msh6P54276 Gm6781-201ENSMUST00000038304 1242 ntBASIC15.67■□□□□ 0.1
Msh6P54276 Sst-201ENSMUST00000004480 599 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Msh6P54276 Olfr1428-201ENSMUST00000087824 945 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
Msh6P54276 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Msh6P54276 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC15.67■□□□□ 0.1
Msh6P54276 Elp5-201ENSMUST00000108594 1454 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Msh6P54276 Cdc42ep2-201ENSMUST00000055458 1491 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Msh6P54276 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Msh6P54276 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Msh6P54276 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Msh6P54276 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Msh6P54276 Gm44260-201ENSMUST00000204946 2094 ntBASIC15.67■□□□□ 0.1
Msh6P54276 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Msh6P54276 Susd3-201ENSMUST00000021816 1317 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Msh6P54276 Olfr520-202ENSMUST00000220185 1330 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Msh6P54276 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Msh6P54276 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Msh6P54276 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Msh6P54276 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Msh6P54276 Zfp957-202ENSMUST00000161649 2751 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Msh6P54276 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC15.67■□□□□ 0.1
Msh6P54276 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Msh6P54276 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Msh6P54276 Tnnt3-206ENSMUST00000105944 753 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Msh6P54276 Tnnt3-210ENSMUST00000105948 753 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Msh6P54276 Tnnt3-212ENSMUST00000105950 1037 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Msh6P54276 Immp2l-202ENSMUST00000132121 1147 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Msh6P54276 Gm11815-201ENSMUST00000139423 708 ntTSL 5 BASIC15.66■□□□□ 0.1
Msh6P54276 Prdx5-203ENSMUST00000149261 755 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
Msh6P54276 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Msh6P54276 Tnnt3-224ENSMUST00000169299 1013 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Msh6P54276 Tnnt3-226ENSMUST00000180152 1067 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Msh6P54276 Gm27530-201ENSMUST00000184096 98 ntBASIC15.66■□□□□ 0.1
Msh6P54276 Gm29539-201ENSMUST00000188031 758 ntTSL 3 BASIC15.66■□□□□ 0.1
Msh6P54276 4930447N08Rik-203ENSMUST00000198879 1157 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Msh6P54276 Mir7686-201ENSMUST00000200604 57 ntBASIC15.66■□□□□ 0.1
Msh6P54276 AC162938.2-204ENSMUST00000216455 984 ntTSL 5 BASIC15.66■□□□□ 0.1
Msh6P54276 Gm29676-202ENSMUST00000222409 364 ntTSL 2 BASIC15.66■□□□□ 0.1
Msh6P54276 4930569F06Rik-201ENSMUST00000036821 433 ntBASIC15.66■□□□□ 0.1
Msh6P54276 Nceh1-202ENSMUST00000091284 830 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Msh6P54276 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Msh6P54276 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Msh6P54276 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Msh6P54276 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Msh6P54276 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Msh6P54276 AC159195.1-201ENSMUST00000225867 2086 ntBASIC15.66■□□□□ 0.1
Msh6P54276 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Msh6P54276 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC15.66■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 40.4 ms