Protein–RNA interactions for Protein: P48379

Rfx2, DNA-binding protein RFX2, mousemouse

Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx2P48379 Gm7104-201ENSMUST00000179741 2532 ntBASIC13.07□□□□□ -0.32
Rfx2P48379 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Rfx2P48379 Wsb2-202ENSMUST00000111959 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Rfx2P48379 Gm37827-201ENSMUST00000194486 1542 ntBASIC13.07□□□□□ -0.32
Rfx2P48379 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC13.07□□□□□ -0.32
Rfx2P48379 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC13.07□□□□□ -0.32
Rfx2P48379 Gm45765-202ENSMUST00000212921 1313 ntTSL 5 BASIC13.07□□□□□ -0.32
Rfx2P48379 Tmem115-201ENSMUST00000010189 2194 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Rfx2P48379 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Rfx2P48379 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Rfx2P48379 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Rfx2P48379 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Rfx2P48379 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC13.06□□□□□ -0.32
Rfx2P48379 4933431M02Rik-201ENSMUST00000203905 1432 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Rfx2P48379 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Rfx2P48379 Syncrip-210ENSMUST00000174391 6257 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Rfx2P48379 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Rfx2P48379 Dcaf10-204ENSMUST00000155551 7250 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Rfx2P48379 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Rfx2P48379 Acvrl1-205ENSMUST00000120754 3506 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Rfx2P48379 Rspo3-201ENSMUST00000092623 3085 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Rfx2P48379 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Rfx2P48379 Uap1l1-201ENSMUST00000102925 3349 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Rfx2P48379 Stpg3-202ENSMUST00000114363 1234 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Rfx2P48379 Gm11930-201ENSMUST00000117788 190 ntBASIC13.06□□□□□ -0.32
Rfx2P48379 Gm12715-201ENSMUST00000121430 1128 ntBASIC13.06□□□□□ -0.32
Rfx2P48379 Gm15547-201ENSMUST00000122152 333 ntBASIC13.06□□□□□ -0.32
Rfx2P48379 1700003G18Rik-201ENSMUST00000140689 633 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Rfx2P48379 Gm15276-201ENSMUST00000145953 498 ntBASIC13.06□□□□□ -0.32
Rfx2P48379 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Rfx2P48379 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Rfx2P48379 Rpl7a-ps10-201ENSMUST00000190579 798 ntBASIC13.06□□□□□ -0.32
Rfx2P48379 Gsdmcl-ps-204ENSMUST00000191285 637 ntTSL 3 BASIC13.06□□□□□ -0.32
Rfx2P48379 Gm44405-201ENSMUST00000198952 126 ntBASIC13.06□□□□□ -0.32
Rfx2P48379 Gm2420-203ENSMUST00000202748 447 ntTSL 5 BASIC13.06□□□□□ -0.32
Rfx2P48379 4933421D24Rik-201ENSMUST00000209302 1286 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Rfx2P48379 Gm18615-201ENSMUST00000222919 1031 ntBASIC13.06□□□□□ -0.32
Rfx2P48379 AC126253.1-202ENSMUST00000226732 835 ntBASIC13.06□□□□□ -0.32
Rfx2P48379 Dnajc17-201ENSMUST00000038439 1008 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Rfx2P48379 Mir339-201ENSMUST00000083659 96 ntBASIC13.06□□□□□ -0.32
Rfx2P48379 Rpl7a-ps3-201ENSMUST00000090170 796 ntBASIC13.06□□□□□ -0.32
Rfx2P48379 Rpl7a-ps5-201ENSMUST00000095218 807 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
Rfx2P48379 Serpinb2-202ENSMUST00000064916 1996 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Rfx2P48379 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Rfx2P48379 Bmp7-201ENSMUST00000009143 3670 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Rfx2P48379 Dgcr2-203ENSMUST00000117082 2987 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Rfx2P48379 Fgd5-201ENSMUST00000089334 6095 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Rfx2P48379 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Rfx2P48379 H2-Ob-204ENSMUST00000173764 1319 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Rfx2P48379 Gm3287-205ENSMUST00000228893 1332 ntBASIC13.06□□□□□ -0.32
Rfx2P48379 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Rfx2P48379 Cog6-201ENSMUST00000036665 3182 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Rfx2P48379 Gm43051-201ENSMUST00000201096 2678 ntBASIC13.06□□□□□ -0.32
Rfx2P48379 Slc39a9-204ENSMUST00000217889 2155 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Rfx2P48379 Gm6210-201ENSMUST00000204734 1942 ntBASIC13.05□□□□□ -0.32
Rfx2P48379 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Rfx2P48379 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Rfx2P48379 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Rfx2P48379 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Rfx2P48379 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Rfx2P48379 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Rfx2P48379 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Rfx2P48379 Grsf1-202ENSMUST00000113234 2286 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Rfx2P48379 Gm42840-201ENSMUST00000200303 2251 ntBASIC13.05□□□□□ -0.32
Rfx2P48379 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Rfx2P48379 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Rfx2P48379 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Rfx2P48379 Skap1-202ENSMUST00000100519 1100 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Rfx2P48379 Ins2-204ENSMUST00000105932 455 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Rfx2P48379 Pafah1b3-202ENSMUST00000108410 689 ntTSL 3 BASIC13.05□□□□□ -0.32
Rfx2P48379 C330007P06Rik-203ENSMUST00000115249 1145 ntTSL 5 BASIC13.05□□□□□ -0.32
Rfx2P48379 Igf1-206ENSMUST00000122100 651 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Rfx2P48379 G630018N14Rik-201ENSMUST00000135656 1231 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Rfx2P48379 Gm16555-201ENSMUST00000159971 1199 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Rfx2P48379 H2al1g-201ENSMUST00000179859 509 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
Rfx2P48379 Tm2d2-202ENSMUST00000210536 727 ntTSL 3 BASIC13.05□□□□□ -0.32
Rfx2P48379 AC112680.3-201ENSMUST00000215297 488 ntTSL 3 BASIC13.05□□□□□ -0.32
Rfx2P48379 Ins2-201ENSMUST00000000220 478 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Rfx2P48379 Riiad1-201ENSMUST00000029785 630 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Rfx2P48379 Nmbr-201ENSMUST00000020015 1599 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Rfx2P48379 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Rfx2P48379 Ralgps2-211ENSMUST00000190648 2498 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Rfx2P48379 Mpv17l-201ENSMUST00000023360 3087 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Rfx2P48379 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Rfx2P48379 Wdcp-205ENSMUST00000220215 2202 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Rfx2P48379 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Rfx2P48379 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Rfx2P48379 Pla2g3-202ENSMUST00000064265 2566 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Rfx2P48379 Fam118b-202ENSMUST00000063782 1662 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Rfx2P48379 Gm36995-201ENSMUST00000126170 5727 ntTSL 2 BASIC13.05□□□□□ -0.32
Rfx2P48379 Olfr607-202ENSMUST00000214347 5706 ntAPPRIS P5 TSL 5 BASIC13.05□□□□□ -0.32
Rfx2P48379 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Rfx2P48379 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Rfx2P48379 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Rfx2P48379 Arntl-206ENSMUST00000211770 2464 ntTSL 5 BASIC13.04□□□□□ -0.32
Rfx2P48379 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Rfx2P48379 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Rfx2P48379 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Rfx2P48379 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Rfx2P48379 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 41.4 ms