Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 Gm15625-201ENSMUST00000117617 1093 ntBASIC12.83□□□□□ -0.36
HttP42859 Gm15886-201ENSMUST00000123155 1250 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
HttP42859 Cideb-201ENSMUST00000001497 1212 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
HttP42859 Gm37826-201ENSMUST00000195329 322 ntBASIC12.83□□□□□ -0.36
HttP42859 Gm43671-201ENSMUST00000200422 433 ntBASIC12.83□□□□□ -0.36
HttP42859 Gm35657-201ENSMUST00000215869 989 ntTSL 5 BASIC12.83□□□□□ -0.36
HttP42859 Tbc1d21-201ENSMUST00000040217 1283 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
HttP42859 Olfr323-201ENSMUST00000070804 972 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
HttP42859 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
HttP42859 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
HttP42859 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
HttP42859 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
HttP42859 Cyp2j13-203ENSMUST00000107078 1493 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
HttP42859 Ripk3-202ENSMUST00000168716 1964 ntTSL 5 BASIC12.83□□□□□ -0.36
HttP42859 AC126257.1-201ENSMUST00000213195 1536 ntBASIC12.83□□□□□ -0.36
HttP42859 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
HttP42859 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
HttP42859 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
HttP42859 Gm11587-201ENSMUST00000128274 1120 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
HttP42859 Gm44805-202ENSMUST00000150569 587 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
HttP42859 4933417D19Rik-201ENSMUST00000181432 1229 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
HttP42859 Gm37207-201ENSMUST00000194284 296 ntBASIC12.83□□□□□ -0.36
HttP42859 Gm18711-201ENSMUST00000199341 750 ntBASIC12.83□□□□□ -0.36
HttP42859 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
HttP42859 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
HttP42859 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
HttP42859 4933406C10Rik-201ENSMUST00000180391 1451 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
HttP42859 Gm18983-201ENSMUST00000222884 2729 ntBASIC12.83□□□□□ -0.36
HttP42859 Gm45576-201ENSMUST00000210981 1322 ntTSL 5 BASIC12.83□□□□□ -0.36
HttP42859 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
HttP42859 N4bp2l1-201ENSMUST00000016279 1905 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
HttP42859 Magee1-201ENSMUST00000033578 3550 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
HttP42859 Zw10-201ENSMUST00000034803 2863 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
HttP42859 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
HttP42859 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
HttP42859 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
HttP42859 Rad18-204ENSMUST00000113182 2220 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
HttP42859 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
HttP42859 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
HttP42859 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
HttP42859 Anxa8-202ENSMUST00000120077 1208 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
HttP42859 AA623943-201ENSMUST00000121794 354 ntBASIC12.82□□□□□ -0.36
HttP42859 2610016A17Rik-201ENSMUST00000185211 474 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
HttP42859 1700085C21Rik-201ENSMUST00000187123 1082 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
HttP42859 D730050B12Rik-201ENSMUST00000223149 585 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
HttP42859 Myl9-201ENSMUST00000088552 1128 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
HttP42859 Lgals1-201ENSMUST00000089377 800 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
HttP42859 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
HttP42859 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
HttP42859 Gm6210-201ENSMUST00000204734 1942 ntBASIC12.82□□□□□ -0.36
HttP42859 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
HttP42859 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
HttP42859 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
HttP42859 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC12.82□□□□□ -0.36
HttP42859 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
HttP42859 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
HttP42859 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
HttP42859 Nrxn1-215ENSMUST00000173917 1439 ntTSL 2 BASIC12.82□□□□□ -0.36
HttP42859 Gm42769-201ENSMUST00000198576 1659 ntBASIC12.82□□□□□ -0.36
HttP42859 Alg12-204ENSMUST00000162183 2130 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
HttP42859 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
HttP42859 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
HttP42859 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
HttP42859 Gsg1-202ENSMUST00000111909 1087 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
HttP42859 Mid1-ps1-201ENSMUST00000167967 1248 ntBASIC12.82□□□□□ -0.36
HttP42859 Gm26957-201ENSMUST00000182645 977 ntBASIC12.82□□□□□ -0.36
HttP42859 Auts2-216ENSMUST00000185450 144 ntTSL 5 BASIC12.82□□□□□ -0.36
HttP42859 Nme6-214ENSMUST00000200468 865 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
HttP42859 Olfr1121-201ENSMUST00000062555 945 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
HttP42859 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC12.82□□□□□ -0.36
HttP42859 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
HttP42859 1700010I14Rik-201ENSMUST00000024650 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
HttP42859 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC12.82□□□□□ -0.36
HttP42859 Foxh1-201ENSMUST00000037824 1306 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
HttP42859 Olfr541-203ENSMUST00000210357 1642 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
HttP42859 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
HttP42859 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
HttP42859 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
HttP42859 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
HttP42859 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
HttP42859 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC12.82□□□□□ -0.36
HttP42859 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
HttP42859 Tprkb-204ENSMUST00000113752 749 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
HttP42859 Gm14232-201ENSMUST00000137176 446 ntTSL 3 BASIC12.82□□□□□ -0.36
HttP42859 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
HttP42859 1600010M07Rik-202ENSMUST00000188662 654 ntTSL 2 BASIC12.82□□□□□ -0.36
HttP42859 C230062I16Rik-203ENSMUST00000208015 648 ntTSL 3 BASIC12.82□□□□□ -0.36
HttP42859 Gm45572-201ENSMUST00000211774 750 ntTSL 5 BASIC12.82□□□□□ -0.36
HttP42859 CT009527.1-201ENSMUST00000224205 339 ntBASIC12.82□□□□□ -0.36
HttP42859 Cby1-201ENSMUST00000023064 1119 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
HttP42859 Krtap12-1-201ENSMUST00000092370 656 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
HttP42859 Gm6304-201ENSMUST00000096579 447 ntBASIC12.82□□□□□ -0.36
HttP42859 Fam71f1-201ENSMUST00000090487 1584 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
HttP42859 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC12.81□□□□□ -0.36
HttP42859 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
HttP42859 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
HttP42859 Gm2000-201ENSMUST00000102782 445 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
HttP42859 Gm27826-201ENSMUST00000175282 255 ntBASIC12.81□□□□□ -0.36
HttP42859 Gm5335-201ENSMUST00000182995 1000 ntBASIC12.81□□□□□ -0.36
HttP42859 Gm43547-201ENSMUST00000197729 328 ntBASIC12.81□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 65.5 ms