Protein–RNA interactions for Protein: P33435

Mmp13, Collagenase 3, mousemouse

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp13P33435 Snap23-203ENSMUST00000116437 2730 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Mmp13P33435 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Mmp13P33435 Iqcc-201ENSMUST00000046675 2639 ntAPPRIS P2 TSL 2 BASIC12.75□□□□□ -0.37
Mmp13P33435 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Mmp13P33435 Sorcs1-205ENSMUST00000209413 4398 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Mmp13P33435 Tex13c2-201ENSMUST00000197237 1834 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Mmp13P33435 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Mmp13P33435 Gemin4-201ENSMUST00000102500 3540 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Mmp13P33435 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Mmp13P33435 Cend1-203ENSMUST00000137488 1697 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Mmp13P33435 Fbf1-202ENSMUST00000106435 4651 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Mmp13P33435 Esco2-201ENSMUST00000022613 2913 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Mmp13P33435 Acta1-201ENSMUST00000034453 1446 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Mmp13P33435 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Mmp13P33435 Olfr649-202ENSMUST00000106859 1382 ntAPPRIS P1 TSL 3 BASIC12.74□□□□□ -0.37
Mmp13P33435 Map1b-203ENSMUST00000223725 2669 ntBASIC12.74□□□□□ -0.37
Mmp13P33435 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC12.74□□□□□ -0.37
Mmp13P33435 Phlda2-201ENSMUST00000010904 757 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Mmp13P33435 3110009E18Rik-203ENSMUST00000112644 488 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Mmp13P33435 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Mmp13P33435 Dcdc2b-203ENSMUST00000179209 864 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Mmp13P33435 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Mmp13P33435 Gm36198-201ENSMUST00000217490 416 ntTSL 3 BASIC12.74□□□□□ -0.37
Mmp13P33435 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Mmp13P33435 n-R5s77-201ENSMUST00000083757 119 ntBASIC12.74□□□□□ -0.37
Mmp13P33435 Pdcd4-202ENSMUST00000074371 2418 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Mmp13P33435 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Mmp13P33435 Ggt1-201ENSMUST00000006508 2167 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Mmp13P33435 Slc20a1-202ENSMUST00000110315 3219 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Mmp13P33435 Tex10-201ENSMUST00000030030 3102 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Mmp13P33435 Cad-201ENSMUST00000013773 7137 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Mmp13P33435 Fuca2-203ENSMUST00000121465 5741 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Mmp13P33435 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC12.73□□□□□ -0.37
Mmp13P33435 Gng5-202ENSMUST00000118280 2419 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Mmp13P33435 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Mmp13P33435 Olfr1419-203ENSMUST00000217617 3087 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Mmp13P33435 Arrb1-201ENSMUST00000032995 3715 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Mmp13P33435 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Mmp13P33435 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC12.73□□□□□ -0.37
Mmp13P33435 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Mmp13P33435 Wdr81-204ENSMUST00000173320 6908 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Mmp13P33435 Mcm9-204ENSMUST00000219838 4132 ntTSL 5 BASIC12.73□□□□□ -0.37
Mmp13P33435 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Mmp13P33435 Nrg1-206ENSMUST00000208205 2645 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Mmp13P33435 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC12.73□□□□□ -0.37
Mmp13P33435 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC12.73□□□□□ -0.37
Mmp13P33435 Cdk4-202ENSMUST00000120226 714 ntTSL 5 BASIC12.73□□□□□ -0.37
Mmp13P33435 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC12.73□□□□□ -0.37
Mmp13P33435 Snhg9-201ENSMUST00000161706 183 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Mmp13P33435 Pcgf1-202ENSMUST00000165164 918 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Mmp13P33435 Gm37424-201ENSMUST00000191727 561 ntBASIC12.73□□□□□ -0.37
Mmp13P33435 Net1-207ENSMUST00000223258 597 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Mmp13P33435 4933434E20Rik-202ENSMUST00000029552 1080 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Mmp13P33435 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Mmp13P33435 Gm9899-201ENSMUST00000065519 555 ntBASIC12.73□□□□□ -0.37
Mmp13P33435 Tinf2-201ENSMUST00000007733 2956 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Mmp13P33435 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Mmp13P33435 Fbf1-201ENSMUST00000103031 5252 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Mmp13P33435 Usp13-201ENSMUST00000072312 7580 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Mmp13P33435 Rab11fip3-203ENSMUST00000122103 5015 ntAPPRIS P4 TSL 1 (best) BASIC12.73□□□□□ -0.37
Mmp13P33435 Adi1-201ENSMUST00000020957 1652 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Mmp13P33435 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC12.73□□□□□ -0.37
Mmp13P33435 Cd163l1-204ENSMUST00000209637 3210 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Mmp13P33435 Wnt3-201ENSMUST00000000127 3076 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Mmp13P33435 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC12.72□□□□□ -0.37
Mmp13P33435 Arhgap24-206ENSMUST00000112854 2991 ntTSL 5 BASIC12.72□□□□□ -0.37
Mmp13P33435 Wdr89-201ENSMUST00000062370 2979 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Mmp13P33435 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Mmp13P33435 Gatad2a-201ENSMUST00000065169 3812 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Mmp13P33435 Vax2os-201ENSMUST00000123402 1435 ntTSL 5 BASIC12.72□□□□□ -0.37
Mmp13P33435 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Mmp13P33435 Faap100-201ENSMUST00000026448 3193 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Mmp13P33435 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC12.72□□□□□ -0.37
Mmp13P33435 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Mmp13P33435 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Mmp13P33435 Wfdc9-202ENSMUST00000109335 547 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Mmp13P33435 Fuom-203ENSMUST00000121115 872 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Mmp13P33435 Gm12984-201ENSMUST00000145711 273 ntTSL 5 BASIC12.72□□□□□ -0.37
Mmp13P33435 Mtmr2-209ENSMUST00000156801 617 ntTSL 5 BASIC12.72□□□□□ -0.37
Mmp13P33435 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC12.72□□□□□ -0.37
Mmp13P33435 Gm23363-201ENSMUST00000175024 79 ntBASIC12.72□□□□□ -0.37
Mmp13P33435 1600014C10Rik-203ENSMUST00000177983 403 ntTSL 2 BASIC12.72□□□□□ -0.37
Mmp13P33435 AU022754-201ENSMUST00000180441 2976 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Mmp13P33435 Gm10371-202ENSMUST00000228010 1081 ntBASIC12.72□□□□□ -0.37
Mmp13P33435 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Mmp13P33435 Pdik1l-201ENSMUST00000061234 4686 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Mmp13P33435 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Mmp13P33435 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Mmp13P33435 Krba1-202ENSMUST00000077093 8380 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Mmp13P33435 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Mmp13P33435 Vat1l-201ENSMUST00000049509 3666 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Mmp13P33435 Abhd14b-209ENSMUST00000216130 1624 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Mmp13P33435 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Mmp13P33435 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Mmp13P33435 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC12.72□□□□□ -0.37
Mmp13P33435 Amer2-201ENSMUST00000022561 10506 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Mmp13P33435 Axl-202ENSMUST00000085948 3899 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Mmp13P33435 Sdad1-201ENSMUST00000031364 5020 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Mmp13P33435 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Mmp13P33435 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC12.72□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 40.3 ms