Protein–RNA interactions for Protein: P31650

Slc6a11, Sodium- and chloride-dependent GABA transporter 3, mousemouse

Predictions only

Length 627 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a11P31650 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Slc6a11P31650 Zic4-204ENSMUST00000172646 2535 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Slc6a11P31650 Insrr-202ENSMUST00000107582 4694 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Slc6a11P31650 Dolpp1-203ENSMUST00000123202 2294 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Slc6a11P31650 Dolpp1-201ENSMUST00000028209 2251 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Slc6a11P31650 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Slc6a11P31650 0610037L13Rik-205ENSMUST00000119394 741 ntTSL 3 BASIC11.83□□□□□ -0.52
Slc6a11P31650 Gm14704-201ENSMUST00000120300 874 ntBASIC11.83□□□□□ -0.52
Slc6a11P31650 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Slc6a11P31650 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Slc6a11P31650 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC11.83□□□□□ -0.52
Slc6a11P31650 Proscos-202ENSMUST00000178990 666 ntBASIC11.83□□□□□ -0.52
Slc6a11P31650 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC11.83□□□□□ -0.52
Slc6a11P31650 Gm26728-201ENSMUST00000185268 595 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Slc6a11P31650 Gm18753-201ENSMUST00000201000 566 ntBASIC11.83□□□□□ -0.52
Slc6a11P31650 Gm9176-201ENSMUST00000219955 1120 ntBASIC11.83□□□□□ -0.52
Slc6a11P31650 AC155237.1-201ENSMUST00000226196 1279 ntBASIC11.83□□□□□ -0.52
Slc6a11P31650 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Slc6a11P31650 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Slc6a11P31650 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Slc6a11P31650 Gm24526-201ENSMUST00000082921 158 ntBASIC11.83□□□□□ -0.52
Slc6a11P31650 Bend3-201ENSMUST00000040147 5882 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Slc6a11P31650 AC156031.2-201ENSMUST00000213107 3310 ntBASIC11.83□□□□□ -0.52
Slc6a11P31650 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Slc6a11P31650 Cdip1-203ENSMUST00000118703 2554 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Slc6a11P31650 Mrps26-202ENSMUST00000145614 4278 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Slc6a11P31650 Tbc1d14-205ENSMUST00000136189 4436 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Slc6a11P31650 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Slc6a11P31650 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Slc6a11P31650 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Slc6a11P31650 Rbm12b2-201ENSMUST00000063839 3327 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Slc6a11P31650 Nfya-212ENSMUST00000162460 3706 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Slc6a11P31650 Ppfia4-205ENSMUST00000189361 5238 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Slc6a11P31650 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Slc6a11P31650 A730071L15Rik-201ENSMUST00000181545 1615 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Slc6a11P31650 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Slc6a11P31650 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Slc6a11P31650 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Slc6a11P31650 Qrich1-201ENSMUST00000006851 3331 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Slc6a11P31650 Myo6-204ENSMUST00000113268 7927 ntTSL 5 BASIC11.82□□□□□ -0.52
Slc6a11P31650 Foxl2os-201ENSMUST00000181706 3095 ntTSL 2 BASIC11.82□□□□□ -0.52
Slc6a11P31650 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Slc6a11P31650 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Slc6a11P31650 Hkdc1-201ENSMUST00000020277 3517 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Slc6a11P31650 Fosb-205ENSMUST00000208326 3654 ntTSL 5 BASIC11.82□□□□□ -0.52
Slc6a11P31650 Mir877-201ENSMUST00000104738 85 ntBASIC11.82□□□□□ -0.52
Slc6a11P31650 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Slc6a11P31650 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC11.82□□□□□ -0.52
Slc6a11P31650 Gm15808-201ENSMUST00000119046 604 ntBASIC11.82□□□□□ -0.52
Slc6a11P31650 Gm10156-201ENSMUST00000122364 462 ntBASIC11.82□□□□□ -0.52
Slc6a11P31650 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Slc6a11P31650 S100a14-201ENSMUST00000164481 915 ntTSL 2 BASIC11.82□□□□□ -0.52
Slc6a11P31650 Gm4271-201ENSMUST00000174444 973 ntBASIC11.82□□□□□ -0.52
Slc6a11P31650 Gm43118-201ENSMUST00000199149 775 ntBASIC11.82□□□□□ -0.52
Slc6a11P31650 Gm45881-201ENSMUST00000210659 517 ntTSL 5 BASIC11.82□□□□□ -0.52
Slc6a11P31650 Gm18935-201ENSMUST00000212692 664 ntBASIC11.82□□□□□ -0.52
Slc6a11P31650 Gm9368-201ENSMUST00000219348 831 ntBASIC11.82□□□□□ -0.52
Slc6a11P31650 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC11.82□□□□□ -0.52
Slc6a11P31650 Majin-201ENSMUST00000025699 1239 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Slc6a11P31650 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Slc6a11P31650 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Slc6a11P31650 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Slc6a11P31650 Rfc2-201ENSMUST00000023867 4995 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Slc6a11P31650 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Slc6a11P31650 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Slc6a11P31650 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Slc6a11P31650 Snap23-203ENSMUST00000116437 2730 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Slc6a11P31650 Gpr176-201ENSMUST00000039160 3899 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Slc6a11P31650 Fyttd1-201ENSMUST00000023489 4312 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Slc6a11P31650 Trappc9-204ENSMUST00000170633 4688 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Slc6a11P31650 Uggt2-212ENSMUST00000156203 6456 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Slc6a11P31650 Chd7-201ENSMUST00000039267 9444 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Slc6a11P31650 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Slc6a11P31650 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Slc6a11P31650 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Slc6a11P31650 Wasf2-202ENSMUST00000105912 2236 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Slc6a11P31650 Lysmd1-201ENSMUST00000066386 2394 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Slc6a11P31650 Git2-202ENSMUST00000086564 2984 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Slc6a11P31650 Ibtk-201ENSMUST00000039213 5650 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Slc6a11P31650 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Slc6a11P31650 Mmab-201ENSMUST00000031560 3020 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Slc6a11P31650 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC11.81□□□□□ -0.52
Slc6a11P31650 Intu-202ENSMUST00000091186 6387 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Slc6a11P31650 Serpinb2-202ENSMUST00000064916 1996 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Slc6a11P31650 Gemin4-201ENSMUST00000102500 3540 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Slc6a11P31650 Cisd2-201ENSMUST00000029815 3361 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Slc6a11P31650 Slc20a1-202ENSMUST00000110315 3219 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Slc6a11P31650 Rgs12-207ENSMUST00000114285 2924 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Slc6a11P31650 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Slc6a11P31650 Iqcc-201ENSMUST00000046675 2639 ntAPPRIS P2 TSL 2 BASIC11.81□□□□□ -0.52
Slc6a11P31650 Epha5-202ENSMUST00000113398 4830 ntTSL 5 BASIC11.81□□□□□ -0.52
Slc6a11P31650 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Slc6a11P31650 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Slc6a11P31650 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Slc6a11P31650 Hdac5-201ENSMUST00000008999 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Slc6a11P31650 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Slc6a11P31650 Gm12203-201ENSMUST00000118235 598 ntBASIC11.81□□□□□ -0.52
Slc6a11P31650 Gm12209-201ENSMUST00000120089 596 ntBASIC11.81□□□□□ -0.52
Slc6a11P31650 Rpl3-ps1-201ENSMUST00000120557 1210 ntBASIC11.81□□□□□ -0.52
Slc6a11P31650 Gm13394-201ENSMUST00000121658 1000 ntBASIC11.81□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 32.4 ms