Protein–RNA interactions for Protein: P29595

Nedd8, NEDD8, mousemouse

Predictions only

Length 81 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nedd8P29595 Nod1-201ENSMUST00000060655 4315 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Nedd8P29595 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Nedd8P29595 Evl-204ENSMUST00000172409 1955 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Nedd8P29595 Gm14698-201ENSMUST00000096420 4226 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
Nedd8P29595 Dcun1d3-202ENSMUST00000098080 3072 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Nedd8P29595 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Nedd8P29595 AC126262.1-201ENSMUST00000221802 1904 ntBASIC11.45□□□□□ -0.58
Nedd8P29595 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Nedd8P29595 Rdh13-201ENSMUST00000008579 3034 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Nedd8P29595 Spice1-201ENSMUST00000050897 4627 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Nedd8P29595 Cd300lf-201ENSMUST00000051264 1864 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
Nedd8P29595 Col6a6-202ENSMUST00000098441 8781 ntAPPRIS P2 TSL 5 BASIC11.45□□□□□ -0.58
Nedd8P29595 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Nedd8P29595 Slc35a4-202ENSMUST00000050476 2362 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Nedd8P29595 Ngfr-201ENSMUST00000000122 3446 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Nedd8P29595 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Nedd8P29595 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC11.45□□□□□ -0.58
Nedd8P29595 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC11.45□□□□□ -0.58
Nedd8P29595 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC11.45□□□□□ -0.58
Nedd8P29595 Gm9061-201ENSMUST00000182707 1006 ntBASIC11.45□□□□□ -0.58
Nedd8P29595 Gm28630-201ENSMUST00000187806 498 ntBASIC11.45□□□□□ -0.58
Nedd8P29595 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC11.45□□□□□ -0.58
Nedd8P29595 Gm43125-201ENSMUST00000201724 730 ntBASIC11.45□□□□□ -0.58
Nedd8P29595 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC11.45□□□□□ -0.58
Nedd8P29595 Gm17795-201ENSMUST00000214505 757 ntBASIC11.45□□□□□ -0.58
Nedd8P29595 Colca2-202ENSMUST00000215038 1269 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Nedd8P29595 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC11.45□□□□□ -0.58
Nedd8P29595 AC159114.1-201ENSMUST00000220349 266 ntBASIC11.45□□□□□ -0.58
Nedd8P29595 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Nedd8P29595 Gm43267-201ENSMUST00000199664 1796 ntBASIC11.45□□□□□ -0.58
Nedd8P29595 Tnc-201ENSMUST00000030056 6833 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Nedd8P29595 Gm33677-201ENSMUST00000220074 2765 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Nedd8P29595 Dixdc1-203ENSMUST00000117646 5719 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Nedd8P29595 Trip4-202ENSMUST00000119245 4211 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Nedd8P29595 Tekt3-201ENSMUST00000035732 1748 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Nedd8P29595 Fer1l4-201ENSMUST00000109611 6106 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Nedd8P29595 6030458C11Rik-204ENSMUST00000228177 3156 ntBASIC11.45□□□□□ -0.58
Nedd8P29595 Sox9-201ENSMUST00000000579 4135 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Nedd8P29595 Zmynd8-220ENSMUST00000170272 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Nedd8P29595 Tiam1-214ENSMUST00000164263 3569 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Nedd8P29595 Fam160b2-201ENSMUST00000022690 4033 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Nedd8P29595 Ltbp2-201ENSMUST00000002073 6769 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Nedd8P29595 AC127597.1-201ENSMUST00000225697 5711 ntBASIC11.45□□□□□ -0.58
Nedd8P29595 Bahcc1-201ENSMUST00000044985 10726 ntAPPRIS P3 TSL 5 BASIC11.45□□□□□ -0.58
Nedd8P29595 Furin-201ENSMUST00000107362 4166 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Nedd8P29595 Shoc2-201ENSMUST00000025932 4106 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Nedd8P29595 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC11.44□□□□□ -0.58
Nedd8P29595 4931428F04Rik-202ENSMUST00000171788 3552 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Nedd8P29595 Gck-201ENSMUST00000102920 2727 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Nedd8P29595 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC11.44□□□□□ -0.58
Nedd8P29595 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
Nedd8P29595 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Nedd8P29595 Mmel1-202ENSMUST00000080559 2926 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
Nedd8P29595 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Nedd8P29595 Gm19692-201ENSMUST00000203856 2084 ntBASIC11.44□□□□□ -0.58
Nedd8P29595 4930519G04Rik-201ENSMUST00000031547 2092 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Nedd8P29595 Aak1-201ENSMUST00000003710 7203 ntAPPRIS P3 TSL 5 BASIC11.44□□□□□ -0.58
Nedd8P29595 Gm8410-201ENSMUST00000117225 605 ntBASIC11.44□□□□□ -0.58
Nedd8P29595 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC11.44□□□□□ -0.58
Nedd8P29595 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC11.44□□□□□ -0.58
Nedd8P29595 Kcnmb4os1-201ENSMUST00000134586 824 ntTSL 2 BASIC11.44□□□□□ -0.58
Nedd8P29595 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC11.44□□□□□ -0.58
Nedd8P29595 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Nedd8P29595 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Nedd8P29595 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
Nedd8P29595 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC11.44□□□□□ -0.58
Nedd8P29595 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
Nedd8P29595 AC164629.2-201ENSMUST00000217916 270 ntBASIC11.44□□□□□ -0.58
Nedd8P29595 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Nedd8P29595 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC11.44□□□□□ -0.58
Nedd8P29595 Gdpd5-208ENSMUST00000213887 2711 ntTSL 5 BASIC11.44□□□□□ -0.58
Nedd8P29595 Ddx11-205ENSMUST00000224497 4141 ntAPPRIS ALT2 BASIC11.44□□□□□ -0.58
Nedd8P29595 Ttll10-202ENSMUST00000051509 2304 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Nedd8P29595 Tnfaip8l3-201ENSMUST00000098760 4403 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Nedd8P29595 Dlec1-206ENSMUST00000140326 5815 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
Nedd8P29595 Elavl2-204ENSMUST00000107110 3671 ntAPPRIS ALT1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Nedd8P29595 Ctsd-201ENSMUST00000066401 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Nedd8P29595 Ank2-217ENSMUST00000182610 2231 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Nedd8P29595 1700019D03Rik-202ENSMUST00000114492 3565 ntAPPRIS P1 TSL 3 BASIC11.44□□□□□ -0.58
Nedd8P29595 Gm15991-202ENSMUST00000212123 3565 ntBASIC11.44□□□□□ -0.58
Nedd8P29595 E330021D16Rik-203ENSMUST00000204830 1813 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Nedd8P29595 Radil-203ENSMUST00000110784 3106 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Nedd8P29595 Fxr1-206ENSMUST00000198051 2127 ntTSL 5 BASIC11.44□□□□□ -0.58
Nedd8P29595 G630016G05Rik-202ENSMUST00000156095 3398 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Nedd8P29595 Nedd9-202ENSMUST00000163623 4626 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
Nedd8P29595 Inpp4a-203ENSMUST00000114933 3004 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Nedd8P29595 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Nedd8P29595 Gm13264-201ENSMUST00000138416 2011 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Nedd8P29595 Magee1-201ENSMUST00000033578 3550 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
Nedd8P29595 Tfr2-201ENSMUST00000031729 2926 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Nedd8P29595 Crispld2-201ENSMUST00000034282 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Nedd8P29595 Epha5-205ENSMUST00000113403 4675 ntAPPRIS P5 TSL 5 BASIC11.43□□□□□ -0.58
Nedd8P29595 Cdc7-204ENSMUST00000118261 3129 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
Nedd8P29595 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Nedd8P29595 Lrrc74b-203ENSMUST00000100123 2231 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
Nedd8P29595 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Nedd8P29595 Parp14-201ENSMUST00000042665 7417 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Nedd8P29595 Hap1-202ENSMUST00000138603 3316 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
Nedd8P29595 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Nedd8P29595 Inpp4a-206ENSMUST00000132615 3038 ntTSL 5 BASIC11.43□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 36.8 ms