Protein–RNA interactions for Protein: P22518

Clk1, Dual specificity protein kinase CLK1, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clk1P22518 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC11.7□□□□□ -0.54
Clk1P22518 Gm15444-201ENSMUST00000148335 388 ntTSL 5 BASIC11.7□□□□□ -0.54
Clk1P22518 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC11.7□□□□□ -0.54
Clk1P22518 Gm22121-201ENSMUST00000175148 54 ntBASIC11.7□□□□□ -0.54
Clk1P22518 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC11.7□□□□□ -0.54
Clk1P22518 Gm18187-201ENSMUST00000196476 984 ntBASIC11.7□□□□□ -0.54
Clk1P22518 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Clk1P22518 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Clk1P22518 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Clk1P22518 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Clk1P22518 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Clk1P22518 Gm10146-201ENSMUST00000072739 309 ntBASIC11.7□□□□□ -0.54
Clk1P22518 Vmn1r213-201ENSMUST00000076897 1155 ntAPPRIS P2 BASIC11.7□□□□□ -0.54
Clk1P22518 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Clk1P22518 Pif1-202ENSMUST00000131483 3309 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Clk1P22518 Slc36a1-203ENSMUST00000108872 5264 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Clk1P22518 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Clk1P22518 Gm26584-201ENSMUST00000180551 3216 ntTSL 5 BASIC11.7□□□□□ -0.54
Clk1P22518 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Clk1P22518 Abca7-202ENSMUST00000132517 6696 ntAPPRIS P3 TSL 5 BASIC11.7□□□□□ -0.54
Clk1P22518 Nfe2l1-210ENSMUST00000167110 3547 ntAPPRIS ALT2 TSL 2 BASIC11.7□□□□□ -0.54
Clk1P22518 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Clk1P22518 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Clk1P22518 Amotl2-211ENSMUST00000153965 4222 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Clk1P22518 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Clk1P22518 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Clk1P22518 Gm7553-201ENSMUST00000185805 1426 ntBASIC11.69□□□□□ -0.54
Clk1P22518 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Clk1P22518 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Clk1P22518 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
Clk1P22518 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Clk1P22518 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Clk1P22518 C1rb-201ENSMUST00000184647 2429 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Clk1P22518 Ndrg2-201ENSMUST00000004673 2099 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
Clk1P22518 Hyal1-202ENSMUST00000112387 2706 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Clk1P22518 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
Clk1P22518 Tinf2-201ENSMUST00000007733 2956 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Clk1P22518 Nckap5-212ENSMUST00000162877 2630 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Clk1P22518 Crispld2-201ENSMUST00000034282 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Clk1P22518 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC11.69□□□□□ -0.54
Clk1P22518 Gm12390-201ENSMUST00000117897 397 ntBASIC11.69□□□□□ -0.54
Clk1P22518 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC11.69□□□□□ -0.54
Clk1P22518 Gm12384-201ENSMUST00000119228 919 ntBASIC11.69□□□□□ -0.54
Clk1P22518 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC11.69□□□□□ -0.54
Clk1P22518 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Clk1P22518 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Clk1P22518 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC11.69□□□□□ -0.54
Clk1P22518 Gm8602-201ENSMUST00000184045 607 ntBASIC11.69□□□□□ -0.54
Clk1P22518 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC11.69□□□□□ -0.54
Clk1P22518 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Clk1P22518 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC11.69□□□□□ -0.54
Clk1P22518 Ddah1-201ENSMUST00000029845 3764 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Clk1P22518 Slc46a2-201ENSMUST00000030081 2833 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Clk1P22518 Gal3st2-201ENSMUST00000094663 2844 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Clk1P22518 Phc1-203ENSMUST00000112600 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Clk1P22518 P2rx1-201ENSMUST00000021141 2486 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Clk1P22518 A1cf-202ENSMUST00000224304 2968 ntAPPRIS ALT1 BASIC11.69□□□□□ -0.54
Clk1P22518 Olfr1495-203ENSMUST00000216980 2063 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Clk1P22518 Gm11298-201ENSMUST00000120503 1799 ntBASIC11.69□□□□□ -0.54
Clk1P22518 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Clk1P22518 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC11.69□□□□□ -0.54
Clk1P22518 A930038B10Rik-202ENSMUST00000181044 3415 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Clk1P22518 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC11.69□□□□□ -0.54
Clk1P22518 Elmsan1-201ENSMUST00000046266 6848 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Clk1P22518 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Clk1P22518 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Clk1P22518 C3-201ENSMUST00000024988 5136 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Clk1P22518 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Clk1P22518 Fxr1-204ENSMUST00000197694 2129 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Clk1P22518 Gm8131-201ENSMUST00000213783 1570 ntBASIC11.68□□□□□ -0.54
Clk1P22518 Oprm1-212ENSMUST00000105603 2053 ntTSL 5 BASIC11.68□□□□□ -0.54
Clk1P22518 Gm44826-201ENSMUST00000207648 2332 ntBASIC11.68□□□□□ -0.54
Clk1P22518 Tmprss7-201ENSMUST00000114562 2587 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Clk1P22518 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC11.68□□□□□ -0.54
Clk1P22518 Gm15824-201ENSMUST00000119516 955 ntBASIC11.68□□□□□ -0.54
Clk1P22518 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC11.68□□□□□ -0.54
Clk1P22518 Olfr455-201ENSMUST00000171307 954 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
Clk1P22518 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC11.68□□□□□ -0.54
Clk1P22518 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC11.68□□□□□ -0.54
Clk1P22518 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC11.68□□□□□ -0.54
Clk1P22518 Lmbr1-202ENSMUST00000179191 4836 ntTSL 5 BASIC11.68□□□□□ -0.54
Clk1P22518 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Clk1P22518 Birc3-201ENSMUST00000013949 2667 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Clk1P22518 Tpra1-219ENSMUST00000203345 3359 ntTSL 5 BASIC11.68□□□□□ -0.54
Clk1P22518 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Clk1P22518 Lrp1-203ENSMUST00000121829 2887 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Clk1P22518 Hap1-202ENSMUST00000138603 3316 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Clk1P22518 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Clk1P22518 AF529169-201ENSMUST00000044491 7202 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Clk1P22518 Robo4-201ENSMUST00000102895 3226 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
Clk1P22518 Cul9-201ENSMUST00000066026 7818 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Clk1P22518 Plekhg4-206ENSMUST00000214056 3654 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Clk1P22518 Ing3-202ENSMUST00000115389 2546 ntTSL 5 BASIC11.67□□□□□ -0.54
Clk1P22518 Gm10829-201ENSMUST00000202084 2988 ntBASIC11.67□□□□□ -0.54
Clk1P22518 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
Clk1P22518 Nr5a2-202ENSMUST00000168126 3446 ntTSL 5 BASIC11.67□□□□□ -0.54
Clk1P22518 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Clk1P22518 Pcdh12-203ENSMUST00000194012 2702 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Clk1P22518 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Clk1P22518 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC11.67□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 33.4 ms