Protein–RNA interactions for Protein: P0CW02

Ly6c1, Lymphocyte antigen 6C1, mousemouse

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ly6c1P0CW02 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC10.54□□□□□ -0.72
Ly6c1P0CW02 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Ly6c1P0CW02 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Ly6c1P0CW02 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Ly6c1P0CW02 Park7-202ENSMUST00000105673 919 ntAPPRIS P1 TSL 5 BASIC10.54□□□□□ -0.72
Ly6c1P0CW02 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC10.54□□□□□ -0.72
Ly6c1P0CW02 Pigp-205ENSMUST00000113917 805 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Ly6c1P0CW02 Gm14739-201ENSMUST00000120424 802 ntBASIC10.54□□□□□ -0.72
Ly6c1P0CW02 Gm11597-201ENSMUST00000121423 964 ntBASIC10.54□□□□□ -0.72
Ly6c1P0CW02 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC10.54□□□□□ -0.72
Ly6c1P0CW02 Mypopos-201ENSMUST00000124897 560 ntTSL 3 BASIC10.54□□□□□ -0.72
Ly6c1P0CW02 4933407E24Rik-201ENSMUST00000133499 969 ntTSL 2 BASIC10.54□□□□□ -0.72
Ly6c1P0CW02 Bcas1os1-201ENSMUST00000133586 1239 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Ly6c1P0CW02 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Ly6c1P0CW02 Phf11b-201ENSMUST00000166121 1184 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Ly6c1P0CW02 Farsb-202ENSMUST00000170217 2036 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Ly6c1P0CW02 H2afz-206ENSMUST00000173790 437 ntTSL 5 BASIC10.54□□□□□ -0.72
Ly6c1P0CW02 1700120C18Rik-201ENSMUST00000182952 985 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Ly6c1P0CW02 Mocs2-215ENSMUST00000184335 646 ntTSL 5 BASIC10.54□□□□□ -0.72
Ly6c1P0CW02 1700031P21Rik-203ENSMUST00000191400 466 ntTSL 3 BASIC10.54□□□□□ -0.72
Ly6c1P0CW02 Gm37215-201ENSMUST00000194927 1259 ntBASIC10.54□□□□□ -0.72
Ly6c1P0CW02 Gm44172-201ENSMUST00000203903 1235 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Ly6c1P0CW02 AC160061.1-201ENSMUST00000217766 533 ntTSL 3 BASIC10.54□□□□□ -0.72
Ly6c1P0CW02 Ddit3-201ENSMUST00000026475 890 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Ly6c1P0CW02 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC10.54□□□□□ -0.72
Ly6c1P0CW02 Itln1-201ENSMUST00000043094 1141 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Ly6c1P0CW02 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Ly6c1P0CW02 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Ly6c1P0CW02 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Ly6c1P0CW02 Gm37737-201ENSMUST00000195013 1638 ntBASIC10.54□□□□□ -0.72
Ly6c1P0CW02 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC10.54□□□□□ -0.72
Ly6c1P0CW02 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Ly6c1P0CW02 Cd3e-201ENSMUST00000102832 1462 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Ly6c1P0CW02 Gm4366-201ENSMUST00000201488 1342 ntBASIC10.54□□□□□ -0.72
Ly6c1P0CW02 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Ly6c1P0CW02 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Ly6c1P0CW02 Hspb7-201ENSMUST00000102486 2769 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Ly6c1P0CW02 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Ly6c1P0CW02 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Ly6c1P0CW02 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC10.53□□□□□ -0.72
Ly6c1P0CW02 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Ly6c1P0CW02 1500009C09Rik-201ENSMUST00000136948 1526 ntAPPRIS P5 TSL 3 BASIC10.53□□□□□ -0.72
Ly6c1P0CW02 Gulp1-203ENSMUST00000160854 1399 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Ly6c1P0CW02 Cnmd-203ENSMUST00000165835 1362 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Ly6c1P0CW02 Wdr53-201ENSMUST00000023474 1394 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Ly6c1P0CW02 Dppa4-201ENSMUST00000050705 1378 ntAPPRIS ALT2 TSL 5 BASIC10.53□□□□□ -0.72
Ly6c1P0CW02 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC10.53□□□□□ -0.72
Ly6c1P0CW02 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC10.53□□□□□ -0.72
Ly6c1P0CW02 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Ly6c1P0CW02 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Ly6c1P0CW02 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Ly6c1P0CW02 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Ly6c1P0CW02 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC10.53□□□□□ -0.72
Ly6c1P0CW02 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC10.53□□□□□ -0.72
Ly6c1P0CW02 Dhx58os-201ENSMUST00000137154 1594 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Ly6c1P0CW02 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Ly6c1P0CW02 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Ly6c1P0CW02 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Ly6c1P0CW02 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Ly6c1P0CW02 AC153962.3-202ENSMUST00000217778 1412 ntTSL 5 BASIC10.53□□□□□ -0.72
Ly6c1P0CW02 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC10.53□□□□□ -0.72
Ly6c1P0CW02 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Ly6c1P0CW02 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Ly6c1P0CW02 Gm26616-202ENSMUST00000195676 3107 ntBASIC10.53□□□□□ -0.72
Ly6c1P0CW02 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Ly6c1P0CW02 Styxl1-202ENSMUST00000111161 963 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Ly6c1P0CW02 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC10.53□□□□□ -0.72
Ly6c1P0CW02 Gm11531-201ENSMUST00000117614 555 ntBASIC10.53□□□□□ -0.72
Ly6c1P0CW02 Gm15703-201ENSMUST00000120250 880 ntBASIC10.53□□□□□ -0.72
Ly6c1P0CW02 Gm13315-201ENSMUST00000120376 991 ntBASIC10.53□□□□□ -0.72
Ly6c1P0CW02 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC10.53□□□□□ -0.72
Ly6c1P0CW02 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Ly6c1P0CW02 Gm12600-201ENSMUST00000146704 708 ntTSL 3 BASIC10.53□□□□□ -0.72
Ly6c1P0CW02 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Ly6c1P0CW02 Crb3-205ENSMUST00000169543 778 ntAPPRIS ALT2 TSL 2 BASIC10.53□□□□□ -0.72
Ly6c1P0CW02 Gm17344-201ENSMUST00000171173 1159 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Ly6c1P0CW02 Gm3159-203ENSMUST00000177764 618 ntAPPRIS ALT2 TSL 5 BASIC10.53□□□□□ -0.72
Ly6c1P0CW02 Gm3269-202ENSMUST00000178137 618 ntAPPRIS ALT2 TSL 5 BASIC10.53□□□□□ -0.72
Ly6c1P0CW02 Gm3594-203ENSMUST00000179747 618 ntAPPRIS ALT2 TSL 5 BASIC10.53□□□□□ -0.72
Ly6c1P0CW02 Gm43758-201ENSMUST00000199500 367 ntBASIC10.53□□□□□ -0.72
Ly6c1P0CW02 Rpl7a-ps2-201ENSMUST00000200554 774 ntBASIC10.53□□□□□ -0.72
Ly6c1P0CW02 Brsk1-205ENSMUST00000206024 1216 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Ly6c1P0CW02 AC158605.1-202ENSMUST00000217860 540 ntTSL 2 BASIC10.53□□□□□ -0.72
Ly6c1P0CW02 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Ly6c1P0CW02 AC156572.1-201ENSMUST00000221040 1161 ntTSL 5 BASIC10.53□□□□□ -0.72
Ly6c1P0CW02 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC10.53□□□□□ -0.72
Ly6c1P0CW02 Acyp1-202ENSMUST00000065913 448 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Ly6c1P0CW02 Gm6169-201ENSMUST00000071118 1030 ntAPPRIS P1 BASIC10.53□□□□□ -0.72
Ly6c1P0CW02 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC10.53□□□□□ -0.72
Ly6c1P0CW02 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC10.53□□□□□ -0.72
Ly6c1P0CW02 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Ly6c1P0CW02 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Ly6c1P0CW02 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC10.53□□□□□ -0.72
Ly6c1P0CW02 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Ly6c1P0CW02 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Ly6c1P0CW02 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Ly6c1P0CW02 Ppara-202ENSMUST00000109422 3413 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Ly6c1P0CW02 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
Ly6c1P0CW02 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC10.53□□□□□ -0.72
Ly6c1P0CW02 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 67.3 ms