Protein–RNA interactions for Protein: P08121

Col3a1, Collagen alpha-1(III) chain, mousemouse

Predictions only

Length 1,464 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col3a1P08121 Mff-209ENSMUST00000160972 1358 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Col3a1P08121 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Col3a1P08121 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Col3a1P08121 Gm43267-201ENSMUST00000199664 1796 ntBASIC14.69□□□□□ -0.06
Col3a1P08121 Cyb5rl-202ENSMUST00000106756 1604 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Col3a1P08121 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Col3a1P08121 Celf2-205ENSMUST00000114927 1721 ntAPPRIS ALT1 TSL 5 BASIC14.69□□□□□ -0.06
Col3a1P08121 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
Col3a1P08121 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Col3a1P08121 Dgkb-205ENSMUST00000221176 1439 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Col3a1P08121 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
Col3a1P08121 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Col3a1P08121 Gm13611-201ENSMUST00000118269 318 ntBASIC14.69□□□□□ -0.06
Col3a1P08121 Dmrtc1a-202ENSMUST00000119624 1149 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
Col3a1P08121 C230038L03Rik-202ENSMUST00000136294 1197 ntTSL 2 BASIC14.69□□□□□ -0.06
Col3a1P08121 Acat3-202ENSMUST00000160378 987 ntTSL 5 BASIC14.69□□□□□ -0.06
Col3a1P08121 5430405H02Rik-202ENSMUST00000176134 1196 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Col3a1P08121 Gm35986-201ENSMUST00000197370 655 ntTSL 2 BASIC14.69□□□□□ -0.06
Col3a1P08121 Gm45909-201ENSMUST00000212413 1031 ntBASIC14.69□□□□□ -0.06
Col3a1P08121 Cct2-206ENSMUST00000219573 637 ntTSL 3 BASIC14.69□□□□□ -0.06
Col3a1P08121 Gm10179-201ENSMUST00000086233 688 ntBASIC14.69□□□□□ -0.06
Col3a1P08121 Tagln3-201ENSMUST00000096057 1240 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Col3a1P08121 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Col3a1P08121 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Col3a1P08121 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Col3a1P08121 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Col3a1P08121 Cyp2d34-201ENSMUST00000109515 1622 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Col3a1P08121 Serpinb12-202ENSMUST00000112724 1623 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Col3a1P08121 Gm37513-201ENSMUST00000194830 2268 ntBASIC14.68□□□□□ -0.06
Col3a1P08121 Gm38378-201ENSMUST00000195153 2268 ntBASIC14.68□□□□□ -0.06
Col3a1P08121 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Col3a1P08121 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Col3a1P08121 Prc1-211ENSMUST00000174199 2128 ntTSL 5 BASIC14.68□□□□□ -0.06
Col3a1P08121 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Col3a1P08121 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Col3a1P08121 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC14.68□□□□□ -0.06
Col3a1P08121 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Col3a1P08121 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Col3a1P08121 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Col3a1P08121 Phkg2-201ENSMUST00000033086 1570 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Col3a1P08121 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Col3a1P08121 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Col3a1P08121 Borcs7-201ENSMUST00000074912 2176 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Col3a1P08121 N4bp2l1-201ENSMUST00000016279 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Col3a1P08121 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Col3a1P08121 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Col3a1P08121 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC14.68□□□□□ -0.06
Col3a1P08121 Tmed5-203ENSMUST00000117759 482 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Col3a1P08121 4930595D18Rik-201ENSMUST00000121608 818 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Col3a1P08121 Neil1-201ENSMUST00000034842 1170 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Col3a1P08121 1110025L11Rik-201ENSMUST00000089104 591 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
Col3a1P08121 Pbld2-201ENSMUST00000020262 2212 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Col3a1P08121 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Col3a1P08121 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Col3a1P08121 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Col3a1P08121 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Col3a1P08121 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Col3a1P08121 Ntpcr-202ENSMUST00000065135 1497 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Col3a1P08121 Olfr1411-203ENSMUST00000216444 1901 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Col3a1P08121 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Col3a1P08121 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Col3a1P08121 Gm16364-201ENSMUST00000153722 1313 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Col3a1P08121 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Col3a1P08121 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Col3a1P08121 Ramp1-201ENSMUST00000097648 2325 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Col3a1P08121 Gm43447-201ENSMUST00000198471 1535 ntBASIC14.67□□□□□ -0.06
Col3a1P08121 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Col3a1P08121 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Col3a1P08121 Ccl27a-206ENSMUST00000108037 590 ntAPPRIS ALT2 TSL 2 BASIC14.67□□□□□ -0.06
Col3a1P08121 Eif5a-205ENSMUST00000108608 775 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Col3a1P08121 Gm13809-201ENSMUST00000117921 597 ntBASIC14.67□□□□□ -0.06
Col3a1P08121 Gm15131-201ENSMUST00000119124 595 ntBASIC14.67□□□□□ -0.06
Col3a1P08121 Cox6a2-201ENSMUST00000033049 680 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Col3a1P08121 Odf2-208ENSMUST00000113763 2364 ntAPPRIS P3 TSL 5 BASIC14.67□□□□□ -0.06
Col3a1P08121 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Col3a1P08121 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Col3a1P08121 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Col3a1P08121 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Col3a1P08121 Daw1-201ENSMUST00000065403 1651 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Col3a1P08121 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC14.67□□□□□ -0.06
Col3a1P08121 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Col3a1P08121 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Col3a1P08121 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC14.67□□□□□ -0.06
Col3a1P08121 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Col3a1P08121 Cyp2c53-ps-203ENSMUST00000176493 1443 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Col3a1P08121 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Col3a1P08121 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Col3a1P08121 Accs-201ENSMUST00000041593 2036 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Col3a1P08121 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Col3a1P08121 Gm37391-201ENSMUST00000194891 2318 ntBASIC14.66□□□□□ -0.06
Col3a1P08121 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Col3a1P08121 Gm826-202ENSMUST00000109475 803 ntAPPRIS ALT2 TSL 2 BASIC14.66□□□□□ -0.06
Col3a1P08121 Avpr2-203ENSMUST00000114395 936 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Col3a1P08121 Gm12951-201ENSMUST00000150216 434 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Col3a1P08121 Gm7030-202ENSMUST00000172968 899 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Col3a1P08121 Gm10774-201ENSMUST00000188689 204 ntBASIC14.66□□□□□ -0.06
Col3a1P08121 Rpl36-ps9-201ENSMUST00000196458 277 ntBASIC14.66□□□□□ -0.06
Col3a1P08121 Qdpr-209ENSMUST00000198258 1172 ntTSL 5 BASIC14.66□□□□□ -0.06
Col3a1P08121 Gm43916-201ENSMUST00000205062 967 ntBASIC14.66□□□□□ -0.06
Col3a1P08121 Fam151b-201ENSMUST00000040106 1152 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 63 ms