Protein–RNA interactions for Protein: O89116

Vti1a, Vesicle transport through interaction with t-SNAREs homolog 1A, mousemouse

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vti1aO89116 Snx33-201ENSMUST00000050916 4571 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Vti1aO89116 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Vti1aO89116 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC13.47□□□□□ -0.25
Vti1aO89116 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC13.46□□□□□ -0.25
Vti1aO89116 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Vti1aO89116 Gm16168-201ENSMUST00000161091 1359 ntTSL 3 BASIC13.46□□□□□ -0.25
Vti1aO89116 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Vti1aO89116 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Vti1aO89116 Gm43463-201ENSMUST00000195967 1803 ntBASIC13.46□□□□□ -0.25
Vti1aO89116 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Vti1aO89116 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Vti1aO89116 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Vti1aO89116 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC13.46□□□□□ -0.25
Vti1aO89116 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Vti1aO89116 Bmp3-201ENSMUST00000031278 6548 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Vti1aO89116 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC13.46□□□□□ -0.25
Vti1aO89116 Tssk5-201ENSMUST00000071119 1518 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Vti1aO89116 Prox1os-201ENSMUST00000110279 828 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Vti1aO89116 Gm13665-201ENSMUST00000120830 528 ntBASIC13.46□□□□□ -0.25
Vti1aO89116 Zfp629-204ENSMUST00000128731 823 ntTSL 3 BASIC13.46□□□□□ -0.25
Vti1aO89116 B9d1os-201ENSMUST00000137010 674 ntBASIC13.46□□□□□ -0.25
Vti1aO89116 Dnajc25-204ENSMUST00000152199 1141 ntTSL 5 BASIC13.46□□□□□ -0.25
Vti1aO89116 Gm22902-201ENSMUST00000158488 302 ntBASIC13.46□□□□□ -0.25
Vti1aO89116 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Vti1aO89116 Iqcf6-201ENSMUST00000171091 537 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
Vti1aO89116 Erdr1-201ENSMUST00000177591 774 ntAPPRIS P5 TSL 5 BASIC13.46□□□□□ -0.25
Vti1aO89116 Mir6927-201ENSMUST00000184494 71 ntBASIC13.46□□□□□ -0.25
Vti1aO89116 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC13.46□□□□□ -0.25
Vti1aO89116 Gm43356-201ENSMUST00000196582 609 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Vti1aO89116 Gm44262-201ENSMUST00000204969 372 ntBASIC13.46□□□□□ -0.25
Vti1aO89116 Gm9445-201ENSMUST00000207454 1285 ntBASIC13.46□□□□□ -0.25
Vti1aO89116 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC13.46□□□□□ -0.25
Vti1aO89116 AC166095.1-201ENSMUST00000223731 1241 ntBASIC13.46□□□□□ -0.25
Vti1aO89116 AC113031.8-201ENSMUST00000227856 631 ntBASIC13.46□□□□□ -0.25
Vti1aO89116 Psmb2-201ENSMUST00000030642 859 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Vti1aO89116 Cryga-201ENSMUST00000061497 625 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Vti1aO89116 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Vti1aO89116 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Vti1aO89116 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Vti1aO89116 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.26
Vti1aO89116 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
Vti1aO89116 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Vti1aO89116 Cad-201ENSMUST00000013773 7137 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Vti1aO89116 Pga5-201ENSMUST00000025647 1417 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Vti1aO89116 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.26
Vti1aO89116 Tspoap1-201ENSMUST00000039627 7616 ntAPPRIS P2 TSL 5 BASIC13.46□□□□□ -0.26
Vti1aO89116 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC13.46□□□□□ -0.26
Vti1aO89116 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Vti1aO89116 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC13.45□□□□□ -0.26
Vti1aO89116 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Vti1aO89116 Rps6kb1-207ENSMUST00000154617 5531 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Vti1aO89116 Myo10-201ENSMUST00000022882 5880 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Vti1aO89116 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Vti1aO89116 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Vti1aO89116 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Vti1aO89116 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
Vti1aO89116 Rgs12-201ENSMUST00000030984 5472 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Vti1aO89116 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Vti1aO89116 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
Vti1aO89116 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Vti1aO89116 Cyp4f17-201ENSMUST00000165999 1693 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
Vti1aO89116 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
Vti1aO89116 Ndufa3-202ENSMUST00000108644 351 ntTSL 3 BASIC13.45□□□□□ -0.26
Vti1aO89116 Gm4909-201ENSMUST00000118749 794 ntBASIC13.45□□□□□ -0.26
Vti1aO89116 Gm25043-201ENSMUST00000158604 212 ntBASIC13.45□□□□□ -0.26
Vti1aO89116 Gm37201-201ENSMUST00000191845 523 ntBASIC13.45□□□□□ -0.26
Vti1aO89116 Gm44651-201ENSMUST00000207343 372 ntBASIC13.45□□□□□ -0.26
Vti1aO89116 1700112L15Rik-201ENSMUST00000212067 510 ntBASIC13.45□□□□□ -0.26
Vti1aO89116 Cdc34-208ENSMUST00000219791 799 ntTSL 3 BASIC13.45□□□□□ -0.26
Vti1aO89116 Abhd11os-203ENSMUST00000222613 363 ntBASIC13.45□□□□□ -0.26
Vti1aO89116 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Vti1aO89116 Tmem14a-202ENSMUST00000027065 1168 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Vti1aO89116 Nppc-201ENSMUST00000027449 1042 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Vti1aO89116 3300002I08Rik-201ENSMUST00000051153 650 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Vti1aO89116 Pxt1-201ENSMUST00000051526 710 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Vti1aO89116 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Vti1aO89116 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Vti1aO89116 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Vti1aO89116 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Vti1aO89116 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Vti1aO89116 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Vti1aO89116 Gm15326-202ENSMUST00000128198 1422 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Vti1aO89116 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
Vti1aO89116 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Vti1aO89116 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC13.45□□□□□ -0.26
Vti1aO89116 Kdm2b-203ENSMUST00000086200 4999 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Vti1aO89116 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Vti1aO89116 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Vti1aO89116 Prss43-201ENSMUST00000077549 2327 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Vti1aO89116 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Vti1aO89116 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Vti1aO89116 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
Vti1aO89116 Map3k2-201ENSMUST00000096575 10791 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Vti1aO89116 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Vti1aO89116 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
Vti1aO89116 Lexm-204ENSMUST00000189032 1549 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Vti1aO89116 Myo18a-220ENSMUST00000164334 5381 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
Vti1aO89116 AC123834.1-201ENSMUST00000225346 2043 ntBASIC13.44□□□□□ -0.26
Vti1aO89116 Tmem186-201ENSMUST00000052505 2736 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Vti1aO89116 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 67.4 ms