Protein–RNA interactions for Protein: O08788

Dctn1, Dynactin subunit 1, mousemouse

Predictions only

Length 1,281 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dctn1O08788 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Dctn1O08788 Rpl28-ps1-201ENSMUST00000121497 414 ntBASIC15.33■□□□□ 0.04
Dctn1O08788 Gm10051-201ENSMUST00000145209 414 ntBASIC15.33■□□□□ 0.04
Dctn1O08788 Gm19459-201ENSMUST00000176240 835 ntBASIC15.33■□□□□ 0.04
Dctn1O08788 Gm27184-201ENSMUST00000185095 607 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Dctn1O08788 Gm21976-204ENSMUST00000186911 528 ntTSL 5 BASIC15.33■□□□□ 0.04
Dctn1O08788 Gm28778-201ENSMUST00000190734 785 ntAPPRIS P1 TSL 3 BASIC15.33■□□□□ 0.04
Dctn1O08788 Gm37246-201ENSMUST00000192665 835 ntBASIC15.33■□□□□ 0.04
Dctn1O08788 Gm18038-201ENSMUST00000197900 485 ntBASIC15.33■□□□□ 0.04
Dctn1O08788 Gm43298-201ENSMUST00000200887 866 ntTSL 3 BASIC15.33■□□□□ 0.04
Dctn1O08788 AC154849.4-201ENSMUST00000224868 365 ntBASIC15.33■□□□□ 0.04
Dctn1O08788 Ankrd7-201ENSMUST00000031489 1190 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Dctn1O08788 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
Dctn1O08788 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Dctn1O08788 4930488B22Rik-201ENSMUST00000172500 1722 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Dctn1O08788 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC15.33■□□□□ 0.04
Dctn1O08788 Gm13812-201ENSMUST00000118061 1347 ntBASIC15.33■□□□□ 0.04
Dctn1O08788 Gm13810-201ENSMUST00000118584 1347 ntBASIC15.33■□□□□ 0.04
Dctn1O08788 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Dctn1O08788 Mthfsd-210ENSMUST00000139782 1366 ntTSL 5 BASIC15.33■□□□□ 0.04
Dctn1O08788 Gm45871-202ENSMUST00000209969 1368 ntTSL 5 BASIC15.33■□□□□ 0.04
Dctn1O08788 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Dctn1O08788 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Dctn1O08788 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Dctn1O08788 Henmt1-205ENSMUST00000196533 1491 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Dctn1O08788 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Dctn1O08788 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
Dctn1O08788 Rorc-204ENSMUST00000200009 1543 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Dctn1O08788 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Dctn1O08788 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Dctn1O08788 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Dctn1O08788 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Dctn1O08788 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Dctn1O08788 Drg2-201ENSMUST00000018568 1788 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Dctn1O08788 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Dctn1O08788 Mir680-2-201ENSMUST00000102163 110 ntBASIC15.32■□□□□ 0.04
Dctn1O08788 Gm23251-201ENSMUST00000103773 110 ntBASIC15.32■□□□□ 0.04
Dctn1O08788 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC15.32■□□□□ 0.04
Dctn1O08788 Got2-ps1-201ENSMUST00000121655 1293 ntBASIC15.32■□□□□ 0.04
Dctn1O08788 Immp2l-202ENSMUST00000132121 1147 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Dctn1O08788 Gm23119-201ENSMUST00000158610 140 ntBASIC15.32■□□□□ 0.04
Dctn1O08788 Gm7568-202ENSMUST00000160446 709 ntTSL 3 BASIC15.32■□□□□ 0.04
Dctn1O08788 9030616G12Rik-201ENSMUST00000181142 644 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Dctn1O08788 Gm44958-201ENSMUST00000203734 736 ntBASIC15.32■□□□□ 0.04
Dctn1O08788 Gm17827-201ENSMUST00000211825 742 ntBASIC15.32■□□□□ 0.04
Dctn1O08788 AC133602.1-201ENSMUST00000227510 509 ntBASIC15.32■□□□□ 0.04
Dctn1O08788 Rpl17-201ENSMUST00000079716 775 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Dctn1O08788 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Dctn1O08788 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Dctn1O08788 Sparc-209ENSMUST00000216313 1304 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Dctn1O08788 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Dctn1O08788 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC15.32■□□□□ 0.04
Dctn1O08788 Fcna-201ENSMUST00000028307 1374 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Dctn1O08788 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Dctn1O08788 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Dctn1O08788 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Dctn1O08788 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Dctn1O08788 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Dctn1O08788 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Dctn1O08788 Gm37691-201ENSMUST00000192147 2573 ntBASIC15.31■□□□□ 0.04
Dctn1O08788 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Dctn1O08788 Mfsd13b-201ENSMUST00000033166 1883 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Dctn1O08788 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Dctn1O08788 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Dctn1O08788 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Dctn1O08788 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Dctn1O08788 CT030684.3-201ENSMUST00000227308 2445 ntBASIC15.31■□□□□ 0.04
Dctn1O08788 Gm15131-201ENSMUST00000119124 595 ntBASIC15.31■□□□□ 0.04
Dctn1O08788 Lmo3-202ENSMUST00000161450 1048 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Dctn1O08788 U2af1l4-234ENSMUST00000171850 564 ntTSL 5 BASIC15.31■□□□□ 0.04
Dctn1O08788 Gm21859-201ENSMUST00000178424 1045 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Dctn1O08788 Dusp13-211ENSMUST00000183943 779 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Dctn1O08788 Gm29237-201ENSMUST00000186216 448 ntTSL 5 BASIC15.31■□□□□ 0.04
Dctn1O08788 AC166992.1-201ENSMUST00000216356 565 ntBASIC15.31■□□□□ 0.04
Dctn1O08788 Gm270-201ENSMUST00000223010 976 ntBASIC15.31■□□□□ 0.04
Dctn1O08788 Cd320-202ENSMUST00000087559 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Dctn1O08788 Gm21811-201ENSMUST00000096485 930 ntBASIC15.31■□□□□ 0.04
Dctn1O08788 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC15.31■□□□□ 0.04
Dctn1O08788 Got1l1-201ENSMUST00000038174 1356 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Dctn1O08788 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Dctn1O08788 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC15.31■□□□□ 0.04
Dctn1O08788 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Dctn1O08788 Wfdc8-201ENSMUST00000094351 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Dctn1O08788 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Dctn1O08788 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Dctn1O08788 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Dctn1O08788 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Dctn1O08788 Olfr157-202ENSMUST00000215442 1766 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Dctn1O08788 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Dctn1O08788 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC15.31■□□□□ 0.04
Dctn1O08788 Nbeal2-211ENSMUST00000196488 8599 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Dctn1O08788 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Dctn1O08788 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Dctn1O08788 Fam114a2-201ENSMUST00000020831 2557 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Dctn1O08788 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Dctn1O08788 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Dctn1O08788 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Dctn1O08788 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Dctn1O08788 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Dctn1O08788 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 35.6 ms