Protein–RNA interactions for Protein: J3QNX5

Shisa8, Cysteine-knot AMPAR-modulating protein 39, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa8J3QNX5 Fosb-203ENSMUST00000207716 3546 ntTSL 5 BASIC11.34□□□□□ -0.59
Shisa8J3QNX5 Dgkz-203ENSMUST00000111303 4169 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Shisa8J3QNX5 Ncapd3-201ENSMUST00000073127 5499 ntAPPRIS P2 TSL 5 BASIC11.34□□□□□ -0.59
Shisa8J3QNX5 Gm15587-201ENSMUST00000146326 3493 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Shisa8J3QNX5 Rnf214-208ENSMUST00000161187 2847 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Shisa8J3QNX5 Tfr2-204ENSMUST00000196471 2839 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Shisa8J3QNX5 Plce1-204ENSMUST00000182481 8357 ntAPPRIS P2 TSL 5 BASIC11.34□□□□□ -0.59
Shisa8J3QNX5 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC11.34□□□□□ -0.59
Shisa8J3QNX5 Mab21l3-202ENSMUST00000118411 2700 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Shisa8J3QNX5 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Shisa8J3QNX5 Mzf1-201ENSMUST00000069289 3597 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Shisa8J3QNX5 Slx4ip-201ENSMUST00000028737 2556 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Shisa8J3QNX5 Acly-201ENSMUST00000007131 4393 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
Shisa8J3QNX5 Gm9544-201ENSMUST00000223349 2482 ntBASIC11.33□□□□□ -0.6
Shisa8J3QNX5 Esrp1-201ENSMUST00000043781 3743 ntTSL 5 BASIC11.33□□□□□ -0.6
Shisa8J3QNX5 Agpat3-205ENSMUST00000105390 3513 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Shisa8J3QNX5 AL645783.1-201ENSMUST00000221416 1832 ntBASIC11.33□□□□□ -0.6
Shisa8J3QNX5 Myo5b-203ENSMUST00000121875 6065 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
Shisa8J3QNX5 Grin1-208ENSMUST00000114318 3920 ntTSL 5 BASIC11.33□□□□□ -0.6
Shisa8J3QNX5 Bhlha15-201ENSMUST00000060747 3494 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Shisa8J3QNX5 Cd163l1-201ENSMUST00000084460 3454 ntAPPRIS P2 TSL 5 BASIC11.33□□□□□ -0.6
Shisa8J3QNX5 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Shisa8J3QNX5 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC11.33□□□□□ -0.6
Shisa8J3QNX5 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC11.33□□□□□ -0.6
Shisa8J3QNX5 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC11.33□□□□□ -0.6
Shisa8J3QNX5 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Shisa8J3QNX5 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC11.33□□□□□ -0.6
Shisa8J3QNX5 Gm32635-201ENSMUST00000221493 1162 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Shisa8J3QNX5 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Shisa8J3QNX5 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Shisa8J3QNX5 Gm5859-201ENSMUST00000165401 2324 ntBASIC11.33□□□□□ -0.6
Shisa8J3QNX5 Lrmp-201ENSMUST00000032396 2319 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Shisa8J3QNX5 Prkag3-201ENSMUST00000081636 2341 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Shisa8J3QNX5 Myo18a-220ENSMUST00000164334 5381 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
Shisa8J3QNX5 6030458C11Rik-204ENSMUST00000228177 3156 ntBASIC11.33□□□□□ -0.6
Shisa8J3QNX5 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Shisa8J3QNX5 Unc13a-201ENSMUST00000030170 10255 ntAPPRIS P2 TSL 5 BASIC11.33□□□□□ -0.6
Shisa8J3QNX5 Tut1-201ENSMUST00000096239 2747 ntAPPRIS P1 TSL 2 BASIC11.33□□□□□ -0.6
Shisa8J3QNX5 Slc6a6-201ENSMUST00000032185 6186 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Shisa8J3QNX5 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC11.33□□□□□ -0.6
Shisa8J3QNX5 Gm38157-201ENSMUST00000194178 1698 ntBASIC11.33□□□□□ -0.6
Shisa8J3QNX5 Mgmt-201ENSMUST00000081510 2894 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Shisa8J3QNX5 Arhgap29-201ENSMUST00000037958 5787 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Shisa8J3QNX5 Gm4735-201ENSMUST00000138679 1302 ntBASIC11.33□□□□□ -0.6
Shisa8J3QNX5 Gm5855-201ENSMUST00000200240 1305 ntBASIC11.33□□□□□ -0.6
Shisa8J3QNX5 Ep400-202ENSMUST00000112433 3399 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Shisa8J3QNX5 AC124577.2-201ENSMUST00000217413 2420 ntBASIC11.33□□□□□ -0.6
Shisa8J3QNX5 Mast1-201ENSMUST00000109741 4872 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Shisa8J3QNX5 Gm19692-201ENSMUST00000203856 2084 ntBASIC11.32□□□□□ -0.6
Shisa8J3QNX5 Cyp8b1-201ENSMUST00000062474 1950 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
Shisa8J3QNX5 Cog4-201ENSMUST00000034203 2737 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Shisa8J3QNX5 Pex3-201ENSMUST00000019945 2129 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Shisa8J3QNX5 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Shisa8J3QNX5 Padi2-201ENSMUST00000030765 4774 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Shisa8J3QNX5 Zfp862-ps-201ENSMUST00000203457 3282 ntBASIC11.32□□□□□ -0.6
Shisa8J3QNX5 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Shisa8J3QNX5 Osbp2-201ENSMUST00000070552 4097 ntAPPRIS P3 TSL 5 BASIC11.32□□□□□ -0.6
Shisa8J3QNX5 Gm13123-201ENSMUST00000122173 492 ntBASIC11.32□□□□□ -0.6
Shisa8J3QNX5 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC11.32□□□□□ -0.6
Shisa8J3QNX5 Mir7654-201ENSMUST00000185082 70 ntBASIC11.32□□□□□ -0.6
Shisa8J3QNX5 Gm6473-201ENSMUST00000188572 1210 ntBASIC11.32□□□□□ -0.6
Shisa8J3QNX5 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Shisa8J3QNX5 Gm7446-201ENSMUST00000221035 1240 ntBASIC11.32□□□□□ -0.6
Shisa8J3QNX5 Gm19220-201ENSMUST00000222682 803 ntBASIC11.32□□□□□ -0.6
Shisa8J3QNX5 AC238811.3-201ENSMUST00000225422 709 ntBASIC11.32□□□□□ -0.6
Shisa8J3QNX5 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Shisa8J3QNX5 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC11.32□□□□□ -0.6
Shisa8J3QNX5 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Shisa8J3QNX5 Trpc7-207ENSMUST00000173817 2406 ntTSL 5 BASIC11.32□□□□□ -0.6
Shisa8J3QNX5 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC11.32□□□□□ -0.6
Shisa8J3QNX5 Epb41l1-206ENSMUST00000109577 6251 ntTSL 5 BASIC11.32□□□□□ -0.6
Shisa8J3QNX5 Sertm1-201ENSMUST00000070342 3083 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Shisa8J3QNX5 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Shisa8J3QNX5 Tmc4-201ENSMUST00000038743 2310 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Shisa8J3QNX5 Retreg1-206ENSMUST00000228306 1430 ntBASIC11.32□□□□□ -0.6
Shisa8J3QNX5 Arfgap1-201ENSMUST00000029092 2714 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Shisa8J3QNX5 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Shisa8J3QNX5 Pcdha2-202ENSMUST00000195590 4645 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Shisa8J3QNX5 Ipo13-201ENSMUST00000036156 3595 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Shisa8J3QNX5 Gm26905-201ENSMUST00000180798 6621 ntTSL 5 BASIC11.32□□□□□ -0.6
Shisa8J3QNX5 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Shisa8J3QNX5 Frmd8-201ENSMUST00000025728 4504 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Shisa8J3QNX5 Rubcn-202ENSMUST00000089684 5311 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Shisa8J3QNX5 Dbx2-201ENSMUST00000054244 3460 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Shisa8J3QNX5 Plcd1-201ENSMUST00000010804 2657 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Shisa8J3QNX5 Gm3365-201ENSMUST00000216296 1480 ntBASIC11.32□□□□□ -0.6
Shisa8J3QNX5 Daxx-207ENSMUST00000174146 2424 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Shisa8J3QNX5 Zfp568-201ENSMUST00000074322 2016 ntAPPRIS P3 TSL 5 BASIC11.31□□□□□ -0.6
Shisa8J3QNX5 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC11.31□□□□□ -0.6
Shisa8J3QNX5 Zfand2a-202ENSMUST00000110851 3121 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Shisa8J3QNX5 Dnmt1-203ENSMUST00000178110 5870 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Shisa8J3QNX5 Ighg1-202ENSMUST00000194304 2482 ntAPPRIS P5 BASIC11.31□□□□□ -0.6
Shisa8J3QNX5 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Shisa8J3QNX5 Gm4755-201ENSMUST00000181803 2647 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Shisa8J3QNX5 Usp22-201ENSMUST00000041683 4434 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Shisa8J3QNX5 Aldh1a7-201ENSMUST00000025656 2066 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Shisa8J3QNX5 Xpo1-201ENSMUST00000020538 5145 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Shisa8J3QNX5 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Shisa8J3QNX5 4931428F04Rik-201ENSMUST00000014981 3492 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Shisa8J3QNX5 Acsf3-201ENSMUST00000015160 2206 ntAPPRIS P2 TSL 5 BASIC11.31□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 33 ms