Protein–RNA interactions for Protein: B5KM66

Syce3, Synaptonemal complex central element protein 3, mousemouse

Predictions only

Length 88 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syce3B5KM66 Nek5-202ENSMUST00000209656 2253 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Syce3B5KM66 Nol4-204ENSMUST00000097651 4549 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Syce3B5KM66 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Syce3B5KM66 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Syce3B5KM66 Fcer2a-201ENSMUST00000005678 2242 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Syce3B5KM66 Gm38049-201ENSMUST00000195698 1372 ntBASIC14.22□□□□□ -0.13
Syce3B5KM66 Uimc1-201ENSMUST00000026997 2931 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Syce3B5KM66 Pcdhb16-201ENSMUST00000051442 5225 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Syce3B5KM66 Arhgap29-201ENSMUST00000037958 5787 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Syce3B5KM66 Stxbp6-202ENSMUST00000120531 4209 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Syce3B5KM66 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC14.21□□□□□ -0.13
Syce3B5KM66 Fut2-201ENSMUST00000069800 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Syce3B5KM66 Kif1a-210ENSMUST00000190723 6141 ntTSL 5 BASIC14.21□□□□□ -0.13
Syce3B5KM66 Mlc1-201ENSMUST00000042594 2783 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Syce3B5KM66 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Syce3B5KM66 Gm15321-201ENSMUST00000121290 288 ntBASIC14.21□□□□□ -0.13
Syce3B5KM66 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC14.21□□□□□ -0.13
Syce3B5KM66 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC14.21□□□□□ -0.13
Syce3B5KM66 Gm43416-201ENSMUST00000201916 1015 ntBASIC14.21□□□□□ -0.13
Syce3B5KM66 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Syce3B5KM66 Majin-201ENSMUST00000025699 1239 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Syce3B5KM66 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Syce3B5KM66 Zfp689-201ENSMUST00000053392 3621 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Syce3B5KM66 Arhgef10l-202ENSMUST00000069623 4531 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Syce3B5KM66 Rtl5-204ENSMUST00000188731 4325 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Syce3B5KM66 Serpina11-201ENSMUST00000074693 1447 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Syce3B5KM66 Pcdha2-202ENSMUST00000195590 4645 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Syce3B5KM66 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Syce3B5KM66 Ggt1-208ENSMUST00000134503 2140 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Syce3B5KM66 Mip-201ENSMUST00000026455 2144 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Syce3B5KM66 Aars2-201ENSMUST00000024733 3348 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Syce3B5KM66 Pmaip1-201ENSMUST00000025399 2646 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Syce3B5KM66 Spns3-202ENSMUST00000092940 2080 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Syce3B5KM66 Hoxc5-201ENSMUST00000001709 2923 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Syce3B5KM66 Olfr649-202ENSMUST00000106859 1382 ntAPPRIS P1 TSL 3 BASIC14.21□□□□□ -0.14
Syce3B5KM66 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC14.21□□□□□ -0.14
Syce3B5KM66 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC14.21□□□□□ -0.14
Syce3B5KM66 Asb3-202ENSMUST00000117883 2509 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Syce3B5KM66 Foxn4-201ENSMUST00000044790 3016 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Syce3B5KM66 Cul9-201ENSMUST00000066026 7818 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Syce3B5KM66 Gtf2i-210ENSMUST00000173341 4302 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Syce3B5KM66 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Syce3B5KM66 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC14.2□□□□□ -0.14
Syce3B5KM66 Wif1-201ENSMUST00000020439 2294 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Syce3B5KM66 Rps6ka6-202ENSMUST00000082034 4170 ntAPPRIS P2 TSL 5 BASIC14.2□□□□□ -0.14
Syce3B5KM66 Esr1-201ENSMUST00000067086 4344 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Syce3B5KM66 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC14.2□□□□□ -0.14
Syce3B5KM66 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC14.2□□□□□ -0.14
Syce3B5KM66 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Syce3B5KM66 Gm42612-201ENSMUST00000197986 623 ntBASIC14.2□□□□□ -0.14
Syce3B5KM66 Gm43170-201ENSMUST00000199827 612 ntBASIC14.2□□□□□ -0.14
Syce3B5KM66 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC14.2□□□□□ -0.14
Syce3B5KM66 AC132863.2-201ENSMUST00000226643 799 ntBASIC14.2□□□□□ -0.14
Syce3B5KM66 Bcdin3d-201ENSMUST00000040313 1271 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Syce3B5KM66 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Syce3B5KM66 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC14.2□□□□□ -0.14
Syce3B5KM66 Zfand2a-202ENSMUST00000110851 3121 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Syce3B5KM66 Cd300lf-201ENSMUST00000051264 1864 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Syce3B5KM66 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Syce3B5KM66 Cldn12-201ENSMUST00000060947 3597 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Syce3B5KM66 Rnf123-218ENSMUST00000178267 4309 ntAPPRIS P3 TSL 5 BASIC14.2□□□□□ -0.14
Syce3B5KM66 Asph-212ENSMUST00000108340 6646 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Syce3B5KM66 Fen1-202ENSMUST00000116542 2100 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Syce3B5KM66 Reln-207ENSMUST00000161356 11699 ntAPPRIS P3 TSL 5 BASIC14.2□□□□□ -0.14
Syce3B5KM66 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Syce3B5KM66 Gck-201ENSMUST00000102920 2727 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Syce3B5KM66 Pex11g-201ENSMUST00000004686 2870 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Syce3B5KM66 Car10-206ENSMUST00000107863 3334 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Syce3B5KM66 Sec22b-201ENSMUST00000029476 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Syce3B5KM66 Ikzf4-204ENSMUST00000222067 2688 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Syce3B5KM66 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Syce3B5KM66 Gm14137-201ENSMUST00000069711 3067 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Syce3B5KM66 Nfatc4-202ENSMUST00000172271 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Syce3B5KM66 Olfr222-203ENSMUST00000215339 2166 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Syce3B5KM66 Dnmt1-203ENSMUST00000178110 5870 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Syce3B5KM66 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Syce3B5KM66 Tbc1d1-202ENSMUST00000101195 5432 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Syce3B5KM66 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Syce3B5KM66 Gm24231-201ENSMUST00000104315 133 ntBASIC14.19□□□□□ -0.14
Syce3B5KM66 Gm15703-201ENSMUST00000120250 880 ntBASIC14.19□□□□□ -0.14
Syce3B5KM66 Gm12151-201ENSMUST00000121374 290 ntBASIC14.19□□□□□ -0.14
Syce3B5KM66 P2rx4-204ENSMUST00000139631 1030 ntTSL 5 BASIC14.19□□□□□ -0.14
Syce3B5KM66 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
Syce3B5KM66 P2rx4-206ENSMUST00000142664 1111 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Syce3B5KM66 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Syce3B5KM66 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC14.19□□□□□ -0.14
Syce3B5KM66 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Syce3B5KM66 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Syce3B5KM66 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Syce3B5KM66 AC124732.1-201ENSMUST00000221551 910 ntBASIC14.19□□□□□ -0.14
Syce3B5KM66 AC165260.3-202ENSMUST00000224550 1031 ntBASIC14.19□□□□□ -0.14
Syce3B5KM66 Cacna1c-201ENSMUST00000075591 7584 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Syce3B5KM66 Lsp1-211ENSMUST00000149521 1910 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Syce3B5KM66 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC14.19□□□□□ -0.14
Syce3B5KM66 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Syce3B5KM66 Cep97-203ENSMUST00000118500 3389 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Syce3B5KM66 Kcnv2-201ENSMUST00000056708 5108 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Syce3B5KM66 Kcnh6-202ENSMUST00000106903 2816 ntTSL 5 BASIC14.19□□□□□ -0.14
Syce3B5KM66 Gpr139-201ENSMUST00000084650 4843 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Syce3B5KM66 Ppip5k1-202ENSMUST00000110625 5226 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 35.4 ms