Protein–RNA interactions for Protein: B1AVM1

Gm12887, Predicted gene 12887, mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm12887B1AVM1 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Gm12887B1AVM1 Gm13689-201ENSMUST00000119360 685 ntBASIC10.05□□□□□ -0.8
Gm12887B1AVM1 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC10.05□□□□□ -0.8
Gm12887B1AVM1 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC10.05□□□□□ -0.8
Gm12887B1AVM1 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC10.05□□□□□ -0.8
Gm12887B1AVM1 Gm28693-202ENSMUST00000190758 331 ntBASIC10.05□□□□□ -0.8
Gm12887B1AVM1 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Gm12887B1AVM1 Gm44064-201ENSMUST00000204964 1087 ntBASIC10.05□□□□□ -0.8
Gm12887B1AVM1 AC166051.1-201ENSMUST00000214313 210 ntBASIC10.05□□□□□ -0.8
Gm12887B1AVM1 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Gm12887B1AVM1 CT943659.1-201ENSMUST00000215459 326 ntBASIC10.05□□□□□ -0.8
Gm12887B1AVM1 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC10.05□□□□□ -0.8
Gm12887B1AVM1 AC124732.2-201ENSMUST00000221977 316 ntBASIC10.05□□□□□ -0.8
Gm12887B1AVM1 Gm10371-202ENSMUST00000228010 1081 ntBASIC10.05□□□□□ -0.8
Gm12887B1AVM1 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Gm12887B1AVM1 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Gm12887B1AVM1 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC10.05□□□□□ -0.8
Gm12887B1AVM1 Susd5-201ENSMUST00000135338 4083 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Gm12887B1AVM1 Gm8038-201ENSMUST00000164674 2044 ntBASIC10.05□□□□□ -0.8
Gm12887B1AVM1 Serpine1-201ENSMUST00000041388 3011 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Gm12887B1AVM1 Maip1-201ENSMUST00000027114 3540 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Gm12887B1AVM1 Nfatc4-202ENSMUST00000172271 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Gm12887B1AVM1 Retreg1-206ENSMUST00000228306 1430 ntBASIC10.05□□□□□ -0.8
Gm12887B1AVM1 Krt33a-201ENSMUST00000018399 1683 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Gm12887B1AVM1 Plcd1-201ENSMUST00000010804 2657 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Gm12887B1AVM1 Mmel1-207ENSMUST00000163732 2935 ntAPPRIS P2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Gm12887B1AVM1 Phf21a-209ENSMUST00000111297 6188 ntAPPRIS ALT2 TSL 5 BASIC10.05□□□□□ -0.8
Gm12887B1AVM1 Phf21a-201ENSMUST00000044036 6187 ntAPPRIS ALT2 TSL 5 BASIC10.05□□□□□ -0.8
Gm12887B1AVM1 Gm42372-201ENSMUST00000206129 5067 ntAPPRIS P1 BASIC10.05□□□□□ -0.8
Gm12887B1AVM1 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC10.05□□□□□ -0.8
Gm12887B1AVM1 Ip6k3-201ENSMUST00000025046 2307 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Gm12887B1AVM1 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Gm12887B1AVM1 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC10.05□□□□□ -0.8
Gm12887B1AVM1 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC10.05□□□□□ -0.8
Gm12887B1AVM1 Mirg-202ENSMUST00000181543 1300 ntTSL 5 BASIC10.05□□□□□ -0.8
Gm12887B1AVM1 Lypd6-202ENSMUST00000112712 3495 ntAPPRIS P1 TSL 5 BASIC10.05□□□□□ -0.8
Gm12887B1AVM1 Gm42463-201ENSMUST00000198041 4886 ntBASIC10.05□□□□□ -0.8
Gm12887B1AVM1 Pafah2-201ENSMUST00000105869 2248 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Gm12887B1AVM1 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Gm12887B1AVM1 Clec16a-203ENSMUST00000115823 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Gm12887B1AVM1 Hps1-209ENSMUST00000162061 2608 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Gm12887B1AVM1 Txndc5-204ENSMUST00000162075 2619 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Gm12887B1AVM1 Madd-207ENSMUST00000111369 5582 ntAPPRIS ALT2 TSL 5 BASIC10.04□□□□□ -0.8
Gm12887B1AVM1 Tunar-201ENSMUST00000180458 3282 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Gm12887B1AVM1 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Gm12887B1AVM1 Zmynd8-220ENSMUST00000170272 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Gm12887B1AVM1 Fen1-202ENSMUST00000116542 2100 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Gm12887B1AVM1 Gm16083-201ENSMUST00000125681 2547 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Gm12887B1AVM1 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC10.04□□□□□ -0.8
Gm12887B1AVM1 4732471J01Rik-204ENSMUST00000206436 2430 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Gm12887B1AVM1 Chd5-201ENSMUST00000005175 9122 ntAPPRIS ALT2 TSL 5 BASIC10.04□□□□□ -0.8
Gm12887B1AVM1 Mmel1-204ENSMUST00000105635 2592 ntAPPRIS ALT2 TSL 5 BASIC10.04□□□□□ -0.8
Gm12887B1AVM1 Lsp1-211ENSMUST00000149521 1910 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Gm12887B1AVM1 Kalrn-207ENSMUST00000114960 6452 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Gm12887B1AVM1 Sypl2-201ENSMUST00000141387 4090 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Gm12887B1AVM1 Taf6-203ENSMUST00000110937 2093 ntTSL 5 BASIC10.04□□□□□ -0.8
Gm12887B1AVM1 Zbtb40-201ENSMUST00000049583 7192 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Gm12887B1AVM1 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Gm12887B1AVM1 Gm13223-201ENSMUST00000118609 747 ntBASIC10.04□□□□□ -0.8
Gm12887B1AVM1 Gm14921-201ENSMUST00000118643 908 ntBASIC10.04□□□□□ -0.8
Gm12887B1AVM1 Gm16342-201ENSMUST00000124025 1025 ntBASIC10.04□□□□□ -0.8
Gm12887B1AVM1 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC10.04□□□□□ -0.8
Gm12887B1AVM1 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Gm12887B1AVM1 Ndufa2-201ENSMUST00000014438 572 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Gm12887B1AVM1 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC10.04□□□□□ -0.8
Gm12887B1AVM1 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Gm12887B1AVM1 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Gm12887B1AVM1 AW822252-206ENSMUST00000208904 237 ntBASIC10.04□□□□□ -0.8
Gm12887B1AVM1 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC10.04□□□□□ -0.8
Gm12887B1AVM1 Bcdin3d-201ENSMUST00000040313 1271 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Gm12887B1AVM1 Gm9797-201ENSMUST00000052902 613 ntBASIC10.04□□□□□ -0.8
Gm12887B1AVM1 Gm20445-201ENSMUST00000061905 565 ntBASIC10.04□□□□□ -0.8
Gm12887B1AVM1 Vmn1r193-202ENSMUST00000227457 6429 ntAPPRIS P1 BASIC10.04□□□□□ -0.8
Gm12887B1AVM1 Serpinh1-203ENSMUST00000207849 2128 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Gm12887B1AVM1 Mroh7-201ENSMUST00000106770 4346 ntAPPRIS P1 TSL 5 BASIC10.04□□□□□ -0.8
Gm12887B1AVM1 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC10.04□□□□□ -0.8
Gm12887B1AVM1 Rapgef2-206ENSMUST00000195708 6964 ntAPPRIS P1 TSL 5 BASIC10.04□□□□□ -0.8
Gm12887B1AVM1 Gnb1l-202ENSMUST00000090086 3549 ntAPPRIS P3 TSL 1 (best) BASIC10.04□□□□□ -0.8
Gm12887B1AVM1 4732414G09Rik-201ENSMUST00000156243 2422 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Gm12887B1AVM1 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Gm12887B1AVM1 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Gm12887B1AVM1 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Gm12887B1AVM1 Kcnj5-201ENSMUST00000034533 4685 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Gm12887B1AVM1 Tut1-201ENSMUST00000096239 2747 ntAPPRIS P1 TSL 2 BASIC10.04□□□□□ -0.8
Gm12887B1AVM1 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Gm12887B1AVM1 Qrich1-202ENSMUST00000112155 3040 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Gm12887B1AVM1 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Gm12887B1AVM1 Rbm4b-201ENSMUST00000036744 1783 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Gm12887B1AVM1 Preb-201ENSMUST00000074840 6300 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Gm12887B1AVM1 Bcas3-202ENSMUST00000092821 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Gm12887B1AVM1 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Gm12887B1AVM1 Ccdc89-201ENSMUST00000061391 2093 ntAPPRIS P1 BASIC10.03□□□□□ -0.8
Gm12887B1AVM1 Cacna1c-205ENSMUST00000112825 7577 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Gm12887B1AVM1 Immt-203ENSMUST00000114151 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Gm12887B1AVM1 Lgr5-206ENSMUST00000172806 2652 ntTSL 5 BASIC10.03□□□□□ -0.8
Gm12887B1AVM1 1700047I17Rik2-201ENSMUST00000177978 3863 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Gm12887B1AVM1 Serpinb2-202ENSMUST00000064916 1996 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Gm12887B1AVM1 Gm43172-201ENSMUST00000202139 2137 ntBASIC10.03□□□□□ -0.8
Gm12887B1AVM1 Corin-202ENSMUST00000167460 4639 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Gm12887B1AVM1 Mrpl45-201ENSMUST00000019026 2431 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Retrieved 100 of 76,532 protein–RNA pairs in 49 ms