Protein–RNA interactions for Protein: A0A075B656

Trav18, T cell receptor alpha variable 18 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav18A0A075B656 Camta1-201ENSMUST00000049790 8423 ntAPPRIS P2 TSL 5 BASIC10.2□□□□□ -0.78
Trav18A0A075B656 Pdhx-201ENSMUST00000011058 2506 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Trav18A0A075B656 Arhgap24-206ENSMUST00000112854 2991 ntTSL 5 BASIC10.2□□□□□ -0.78
Trav18A0A075B656 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC10.2□□□□□ -0.78
Trav18A0A075B656 Atxn7l1os2-201ENSMUST00000138617 2019 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Trav18A0A075B656 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Trav18A0A075B656 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Trav18A0A075B656 Ankzf1-208ENSMUST00000152233 2739 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Trav18A0A075B656 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC10.2□□□□□ -0.78
Trav18A0A075B656 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC10.2□□□□□ -0.78
Trav18A0A075B656 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC10.2□□□□□ -0.78
Trav18A0A075B656 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC10.2□□□□□ -0.78
Trav18A0A075B656 Rai1-207ENSMUST00000171108 7125 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Trav18A0A075B656 Gm4271-201ENSMUST00000174444 973 ntBASIC10.2□□□□□ -0.78
Trav18A0A075B656 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC10.2□□□□□ -0.78
Trav18A0A075B656 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC10.2□□□□□ -0.78
Trav18A0A075B656 Gm27839-201ENSMUST00000184242 106 ntBASIC10.2□□□□□ -0.78
Trav18A0A075B656 Gm4768-201ENSMUST00000206199 686 ntBASIC10.2□□□□□ -0.78
Trav18A0A075B656 E230029C05Rik-205ENSMUST00000208362 2444 ntTSL 2 BASIC10.2□□□□□ -0.78
Trav18A0A075B656 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
Trav18A0A075B656 Gm17794-201ENSMUST00000220252 955 ntBASIC10.2□□□□□ -0.78
Trav18A0A075B656 AC164426.2-201ENSMUST00000225993 2492 ntBASIC10.2□□□□□ -0.78
Trav18A0A075B656 Osgepl1-201ENSMUST00000027265 1868 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Trav18A0A075B656 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Trav18A0A075B656 Ccdc114-201ENSMUST00000038720 2460 ntAPPRIS P2 TSL 1 (best) BASIC10.2□□□□□ -0.78
Trav18A0A075B656 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Trav18A0A075B656 Vwa7-201ENSMUST00000007245 4313 ntAPPRIS P3 TSL 1 (best) BASIC10.2□□□□□ -0.78
Trav18A0A075B656 Ptcd3-201ENSMUST00000082094 2581 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Trav18A0A075B656 Armcx3-202ENSMUST00000086880 2024 ntAPPRIS P1 TSL 2 BASIC10.2□□□□□ -0.78
Trav18A0A075B656 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Trav18A0A075B656 Dnaic2-202ENSMUST00000092469 2799 ntAPPRIS P1 TSL 5 BASIC10.2□□□□□ -0.78
Trav18A0A075B656 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Trav18A0A075B656 Tmem237-202ENSMUST00000094917 1869 ntAPPRIS P4 TSL 1 (best) BASIC10.2□□□□□ -0.78
Trav18A0A075B656 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Trav18A0A075B656 Unc5c-202ENSMUST00000106236 9646 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Trav18A0A075B656 Dnmt1-203ENSMUST00000178110 5870 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
Trav18A0A075B656 Sorcs1-203ENSMUST00000164039 7241 ntAPPRIS ALT1 TSL 5 BASIC10.2□□□□□ -0.78
Trav18A0A075B656 Adck2-204ENSMUST00000140364 3542 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Trav18A0A075B656 Fyb2-201ENSMUST00000106803 3136 ntAPPRIS P2 TSL 1 (best) BASIC10.2□□□□□ -0.78
Trav18A0A075B656 Cnot7-211ENSMUST00000149992 2982 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Trav18A0A075B656 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Trav18A0A075B656 Gm5936-201ENSMUST00000114116 2857 ntAPPRIS P1 TSL 3 BASIC10.2□□□□□ -0.78
Trav18A0A075B656 Gm5640-201ENSMUST00000114119 2861 ntAPPRIS P1 TSL 3 BASIC10.2□□□□□ -0.78
Trav18A0A075B656 Eif1a-201ENSMUST00000078079 2879 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Trav18A0A075B656 DXBay18-201ENSMUST00000080324 2862 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Trav18A0A075B656 Gm14685-201ENSMUST00000088459 2864 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Trav18A0A075B656 Krba1-202ENSMUST00000077093 8380 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Trav18A0A075B656 Dync1i1-202ENSMUST00000115555 2669 ntAPPRIS ALT1 TSL 5 BASIC10.2□□□□□ -0.78
Trav18A0A075B656 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Trav18A0A075B656 Dnmbp-201ENSMUST00000026209 4882 ntAPPRIS P2 TSL 2 BASIC10.19□□□□□ -0.78
Trav18A0A075B656 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Trav18A0A075B656 Gm3764-205ENSMUST00000181134 2203 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Trav18A0A075B656 Ank2-217ENSMUST00000182610 2231 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Trav18A0A075B656 Map3k2-201ENSMUST00000096575 10791 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Trav18A0A075B656 Kcnip4-207ENSMUST00000176191 2116 ntTSL 5 BASIC10.19□□□□□ -0.78
Trav18A0A075B656 Ndrg2-201ENSMUST00000004673 2099 ntAPPRIS P3 TSL 1 (best) BASIC10.19□□□□□ -0.78
Trav18A0A075B656 Klf11-201ENSMUST00000020982 4086 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Trav18A0A075B656 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
Trav18A0A075B656 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC10.19□□□□□ -0.78
Trav18A0A075B656 Dis3l-208ENSMUST00000168844 3575 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Trav18A0A075B656 Gm9951-202ENSMUST00000149618 1772 ntTSL 2 BASIC10.19□□□□□ -0.78
Trav18A0A075B656 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Trav18A0A075B656 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC10.19□□□□□ -0.78
Trav18A0A075B656 2810407A14Rik-201ENSMUST00000069809 1699 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Trav18A0A075B656 A730071L15Rik-201ENSMUST00000181545 1615 ntAPPRIS P1 BASIC10.19□□□□□ -0.78
Trav18A0A075B656 Cbfa2t2-202ENSMUST00000099178 3247 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Trav18A0A075B656 Arhgap4-203ENSMUST00000114405 6299 ntAPPRIS ALT2 TSL 5 BASIC10.19□□□□□ -0.78
Trav18A0A075B656 Trim46-201ENSMUST00000041022 3122 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Trav18A0A075B656 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Trav18A0A075B656 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Trav18A0A075B656 Ly75-202ENSMUST00000112533 6901 ntAPPRIS ALT2 TSL 5 BASIC10.19□□□□□ -0.78
Trav18A0A075B656 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC10.19□□□□□ -0.78
Trav18A0A075B656 Gm24231-201ENSMUST00000104315 133 ntBASIC10.19□□□□□ -0.78
Trav18A0A075B656 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC10.19□□□□□ -0.78
Trav18A0A075B656 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC10.19□□□□□ -0.78
Trav18A0A075B656 Plekhg5-204ENSMUST00000118648 3818 ntAPPRIS ALT2 TSL 5 BASIC10.19□□□□□ -0.78
Trav18A0A075B656 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC10.19□□□□□ -0.78
Trav18A0A075B656 Gm11814-201ENSMUST00000119515 929 ntBASIC10.19□□□□□ -0.78
Trav18A0A075B656 Gm12984-201ENSMUST00000145711 273 ntTSL 5 BASIC10.19□□□□□ -0.78
Trav18A0A075B656 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Trav18A0A075B656 Gm24644-201ENSMUST00000157114 139 ntBASIC10.19□□□□□ -0.78
Trav18A0A075B656 Rmrp-201ENSMUST00000157463 271 ntBASIC10.19□□□□□ -0.78
Trav18A0A075B656 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
Trav18A0A075B656 Gm7029-201ENSMUST00000173226 450 ntBASIC10.19□□□□□ -0.78
Trav18A0A075B656 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Trav18A0A075B656 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Trav18A0A075B656 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC10.19□□□□□ -0.78
Trav18A0A075B656 Gm27390-201ENSMUST00000184516 176 ntBASIC10.19□□□□□ -0.78
Trav18A0A075B656 Gm27486-201ENSMUST00000184923 80 ntBASIC10.19□□□□□ -0.78
Trav18A0A075B656 AL732506.1-201ENSMUST00000226420 281 ntBASIC10.19□□□□□ -0.78
Trav18A0A075B656 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Trav18A0A075B656 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Trav18A0A075B656 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Trav18A0A075B656 Zic4-204ENSMUST00000172646 2535 ntAPPRIS P1 TSL 5 BASIC10.19□□□□□ -0.78
Trav18A0A075B656 Upk3b-201ENSMUST00000062606 3530 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Trav18A0A075B656 Dolpp1-203ENSMUST00000123202 2294 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Trav18A0A075B656 Dolpp1-201ENSMUST00000028209 2251 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Trav18A0A075B656 Syvn1-207ENSMUST00000156550 3363 ntAPPRIS ALT2 TSL 5 BASIC10.19□□□□□ -0.78
Trav18A0A075B656 Fxr1-204ENSMUST00000197694 2129 ntAPPRIS P1 TSL 5 BASIC10.19□□□□□ -0.78
Trav18A0A075B656 Serpinh1-203ENSMUST00000207849 2128 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Retrieved 100 of 76,532 protein–RNA pairs in 32.7 ms