Protein–RNA interactions for Protein: Q9Z0H3

Smarcb1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1, mousemouse

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcb1Q9Z0H3 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Smarcb1Q9Z0H3 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Smarcb1Q9Z0H3 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC21.8■■□□□ 1.08
Smarcb1Q9Z0H3 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Smarcb1Q9Z0H3 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Smarcb1Q9Z0H3 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
Smarcb1Q9Z0H3 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC21.8■■□□□ 1.08
Smarcb1Q9Z0H3 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC21.8■■□□□ 1.08
Smarcb1Q9Z0H3 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
Smarcb1Q9Z0H3 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Smarcb1Q9Z0H3 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC21.79■■□□□ 1.08
Smarcb1Q9Z0H3 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC21.79■■□□□ 1.08
Smarcb1Q9Z0H3 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Smarcb1Q9Z0H3 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
Smarcb1Q9Z0H3 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Smarcb1Q9Z0H3 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC21.78■■□□□ 1.08
Smarcb1Q9Z0H3 AC140930.3-201ENSMUST00000222935 274 ntBASIC21.78■■□□□ 1.08
Smarcb1Q9Z0H3 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
Smarcb1Q9Z0H3 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC21.78■■□□□ 1.08
Smarcb1Q9Z0H3 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Smarcb1Q9Z0H3 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Smarcb1Q9Z0H3 H3f3aos-201ENSMUST00000097448 2905 ntBASIC21.77■■□□□ 1.08
Smarcb1Q9Z0H3 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
Smarcb1Q9Z0H3 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Smarcb1Q9Z0H3 Gm12821-201ENSMUST00000120022 600 ntBASIC21.77■■□□□ 1.08
Smarcb1Q9Z0H3 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.08
Smarcb1Q9Z0H3 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC21.77■■□□□ 1.08
Smarcb1Q9Z0H3 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
Smarcb1Q9Z0H3 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC21.77■■□□□ 1.07
Smarcb1Q9Z0H3 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
Smarcb1Q9Z0H3 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Smarcb1Q9Z0H3 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
Smarcb1Q9Z0H3 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Smarcb1Q9Z0H3 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC21.76■■□□□ 1.07
Smarcb1Q9Z0H3 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Smarcb1Q9Z0H3 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC21.76■■□□□ 1.07
Smarcb1Q9Z0H3 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Smarcb1Q9Z0H3 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Smarcb1Q9Z0H3 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
Smarcb1Q9Z0H3 Gm4430-201ENSMUST00000192413 1943 ntBASIC21.76■■□□□ 1.07
Smarcb1Q9Z0H3 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Smarcb1Q9Z0H3 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Smarcb1Q9Z0H3 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
Smarcb1Q9Z0H3 Kdm3b-204ENSMUST00000224715 2032 ntBASIC21.75■■□□□ 1.07
Smarcb1Q9Z0H3 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
Smarcb1Q9Z0H3 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
Smarcb1Q9Z0H3 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC21.75■■□□□ 1.07
Smarcb1Q9Z0H3 Appbp2os-202ENSMUST00000206972 447 ntBASIC21.75■■□□□ 1.07
Smarcb1Q9Z0H3 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC21.75■■□□□ 1.07
Smarcb1Q9Z0H3 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Smarcb1Q9Z0H3 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
Smarcb1Q9Z0H3 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Smarcb1Q9Z0H3 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Smarcb1Q9Z0H3 Gm7143-201ENSMUST00000222811 859 ntBASIC21.74■■□□□ 1.07
Smarcb1Q9Z0H3 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Smarcb1Q9Z0H3 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
Smarcb1Q9Z0H3 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Smarcb1Q9Z0H3 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
Smarcb1Q9Z0H3 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
Smarcb1Q9Z0H3 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
Smarcb1Q9Z0H3 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
Smarcb1Q9Z0H3 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC21.73■■□□□ 1.07
Smarcb1Q9Z0H3 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Smarcb1Q9Z0H3 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
Smarcb1Q9Z0H3 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
Smarcb1Q9Z0H3 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC21.72■■□□□ 1.07
Smarcb1Q9Z0H3 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Smarcb1Q9Z0H3 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Smarcb1Q9Z0H3 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
Smarcb1Q9Z0H3 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Smarcb1Q9Z0H3 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Smarcb1Q9Z0H3 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Smarcb1Q9Z0H3 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Smarcb1Q9Z0H3 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
Smarcb1Q9Z0H3 Gm42418-201ENSMUST00000182010 1831 ntBASIC21.71■■□□□ 1.07
Smarcb1Q9Z0H3 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Smarcb1Q9Z0H3 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC21.71■■□□□ 1.07
Smarcb1Q9Z0H3 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC21.71■■□□□ 1.07
Smarcb1Q9Z0H3 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
Smarcb1Q9Z0H3 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
Smarcb1Q9Z0H3 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Smarcb1Q9Z0H3 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
Smarcb1Q9Z0H3 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.07
Smarcb1Q9Z0H3 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC21.7■■□□□ 1.06
Smarcb1Q9Z0H3 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Smarcb1Q9Z0H3 AC164883.3-201ENSMUST00000227396 1774 ntBASIC21.7■■□□□ 1.06
Smarcb1Q9Z0H3 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC21.7■■□□□ 1.06
Smarcb1Q9Z0H3 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Smarcb1Q9Z0H3 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Smarcb1Q9Z0H3 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.06
Smarcb1Q9Z0H3 AC153962.1-201ENSMUST00000218530 1948 ntBASIC21.7■■□□□ 1.06
Smarcb1Q9Z0H3 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Smarcb1Q9Z0H3 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Smarcb1Q9Z0H3 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
Smarcb1Q9Z0H3 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC21.69■■□□□ 1.06
Smarcb1Q9Z0H3 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC21.69■■□□□ 1.06
Smarcb1Q9Z0H3 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Smarcb1Q9Z0H3 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Smarcb1Q9Z0H3 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC21.69■■□□□ 1.06
Smarcb1Q9Z0H3 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
Retrieved 100 of 76,532 protein–RNA pairs in 19.2 ms