Protein–RNA interactions for Protein: Q9QZM3

Clcf1, Cardiotrophin-like cytokine factor 1, mousemouse

Predictions only

Length 225 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcf1Q9QZM3 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Clcf1Q9QZM3 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC18.9■□□□□ 0.62
Clcf1Q9QZM3 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Clcf1Q9QZM3 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
Clcf1Q9QZM3 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Clcf1Q9QZM3 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Clcf1Q9QZM3 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Clcf1Q9QZM3 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC18.9■□□□□ 0.62
Clcf1Q9QZM3 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC18.9■□□□□ 0.62
Clcf1Q9QZM3 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC18.9■□□□□ 0.62
Clcf1Q9QZM3 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
Clcf1Q9QZM3 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.62
Clcf1Q9QZM3 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Clcf1Q9QZM3 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Clcf1Q9QZM3 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Clcf1Q9QZM3 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Clcf1Q9QZM3 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Clcf1Q9QZM3 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Clcf1Q9QZM3 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
Clcf1Q9QZM3 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Clcf1Q9QZM3 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Clcf1Q9QZM3 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC18.88■□□□□ 0.61
Clcf1Q9QZM3 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Clcf1Q9QZM3 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
Clcf1Q9QZM3 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Clcf1Q9QZM3 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Clcf1Q9QZM3 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Clcf1Q9QZM3 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Clcf1Q9QZM3 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC18.87■□□□□ 0.61
Clcf1Q9QZM3 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
Clcf1Q9QZM3 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC18.87■□□□□ 0.61
Clcf1Q9QZM3 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Clcf1Q9QZM3 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC18.87■□□□□ 0.61
Clcf1Q9QZM3 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Clcf1Q9QZM3 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Clcf1Q9QZM3 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
Clcf1Q9QZM3 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Clcf1Q9QZM3 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Clcf1Q9QZM3 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC18.86■□□□□ 0.61
Clcf1Q9QZM3 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Clcf1Q9QZM3 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Clcf1Q9QZM3 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC18.86■□□□□ 0.61
Clcf1Q9QZM3 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Clcf1Q9QZM3 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Clcf1Q9QZM3 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC18.85■□□□□ 0.61
Clcf1Q9QZM3 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Clcf1Q9QZM3 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Clcf1Q9QZM3 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Clcf1Q9QZM3 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Clcf1Q9QZM3 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Clcf1Q9QZM3 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Clcf1Q9QZM3 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Clcf1Q9QZM3 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC18.84■□□□□ 0.61
Clcf1Q9QZM3 Gm40881-201ENSMUST00000223397 166 ntBASIC18.84■□□□□ 0.61
Clcf1Q9QZM3 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Clcf1Q9QZM3 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
Clcf1Q9QZM3 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Clcf1Q9QZM3 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Clcf1Q9QZM3 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Clcf1Q9QZM3 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Clcf1Q9QZM3 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.61
Clcf1Q9QZM3 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Clcf1Q9QZM3 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Clcf1Q9QZM3 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Clcf1Q9QZM3 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Clcf1Q9QZM3 Gm7417-201ENSMUST00000192950 473 ntBASIC18.83■□□□□ 0.6
Clcf1Q9QZM3 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Clcf1Q9QZM3 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Clcf1Q9QZM3 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Clcf1Q9QZM3 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Clcf1Q9QZM3 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Clcf1Q9QZM3 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Clcf1Q9QZM3 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Clcf1Q9QZM3 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Clcf1Q9QZM3 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Clcf1Q9QZM3 Gm10399-202ENSMUST00000202768 748 ntBASIC18.82■□□□□ 0.6
Clcf1Q9QZM3 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Clcf1Q9QZM3 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Clcf1Q9QZM3 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Clcf1Q9QZM3 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Clcf1Q9QZM3 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Clcf1Q9QZM3 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC18.81■□□□□ 0.6
Clcf1Q9QZM3 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Clcf1Q9QZM3 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Clcf1Q9QZM3 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Clcf1Q9QZM3 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Clcf1Q9QZM3 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Clcf1Q9QZM3 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Clcf1Q9QZM3 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Clcf1Q9QZM3 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC18.8■□□□□ 0.6
Clcf1Q9QZM3 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC18.8■□□□□ 0.6
Clcf1Q9QZM3 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC18.8■□□□□ 0.6
Clcf1Q9QZM3 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC18.8■□□□□ 0.6
Clcf1Q9QZM3 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Clcf1Q9QZM3 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Clcf1Q9QZM3 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC18.8■□□□□ 0.6
Clcf1Q9QZM3 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Clcf1Q9QZM3 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Clcf1Q9QZM3 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
Clcf1Q9QZM3 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC18.79■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 12.3 ms