Protein–RNA interactions for Protein: Q9ER80

Rtp4, Receptor-transporting protein 4, mousemouse

Known RBP Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtp4Q9ER80 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Rtp4Q9ER80 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Rtp4Q9ER80 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC19.54■□□□□ 0.72
Rtp4Q9ER80 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC19.53■□□□□ 0.72
Rtp4Q9ER80 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC19.53■□□□□ 0.72
Rtp4Q9ER80 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Rtp4Q9ER80 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Rtp4Q9ER80 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Rtp4Q9ER80 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC19.53■□□□□ 0.72
Rtp4Q9ER80 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC19.53■□□□□ 0.72
Rtp4Q9ER80 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC19.53■□□□□ 0.72
Rtp4Q9ER80 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC19.53■□□□□ 0.72
Rtp4Q9ER80 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Rtp4Q9ER80 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC19.53■□□□□ 0.72
Rtp4Q9ER80 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Rtp4Q9ER80 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC19.53■□□□□ 0.72
Rtp4Q9ER80 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Rtp4Q9ER80 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Rtp4Q9ER80 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
Rtp4Q9ER80 Gm42418-201ENSMUST00000182010 1831 ntBASIC19.52■□□□□ 0.72
Rtp4Q9ER80 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Rtp4Q9ER80 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Rtp4Q9ER80 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Rtp4Q9ER80 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Rtp4Q9ER80 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Rtp4Q9ER80 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC19.51■□□□□ 0.71
Rtp4Q9ER80 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Rtp4Q9ER80 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Rtp4Q9ER80 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
Rtp4Q9ER80 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Rtp4Q9ER80 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
Rtp4Q9ER80 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Rtp4Q9ER80 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Rtp4Q9ER80 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC19.5■□□□□ 0.71
Rtp4Q9ER80 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Rtp4Q9ER80 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Rtp4Q9ER80 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC19.5■□□□□ 0.71
Rtp4Q9ER80 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC19.5■□□□□ 0.71
Rtp4Q9ER80 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC19.49■□□□□ 0.71
Rtp4Q9ER80 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Rtp4Q9ER80 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Rtp4Q9ER80 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
Rtp4Q9ER80 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Rtp4Q9ER80 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Rtp4Q9ER80 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC19.49■□□□□ 0.71
Rtp4Q9ER80 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC19.49■□□□□ 0.71
Rtp4Q9ER80 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Rtp4Q9ER80 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Rtp4Q9ER80 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Rtp4Q9ER80 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Rtp4Q9ER80 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
Rtp4Q9ER80 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Rtp4Q9ER80 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Rtp4Q9ER80 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Rtp4Q9ER80 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC19.48■□□□□ 0.71
Rtp4Q9ER80 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC19.48■□□□□ 0.71
Rtp4Q9ER80 Gm7417-201ENSMUST00000192950 473 ntBASIC19.48■□□□□ 0.71
Rtp4Q9ER80 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC19.48■□□□□ 0.71
Rtp4Q9ER80 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Rtp4Q9ER80 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Rtp4Q9ER80 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Rtp4Q9ER80 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Rtp4Q9ER80 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Rtp4Q9ER80 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC19.47■□□□□ 0.71
Rtp4Q9ER80 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC19.47■□□□□ 0.71
Rtp4Q9ER80 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC19.47■□□□□ 0.71
Rtp4Q9ER80 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Rtp4Q9ER80 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Rtp4Q9ER80 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Rtp4Q9ER80 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Rtp4Q9ER80 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Rtp4Q9ER80 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
Rtp4Q9ER80 Gm11847-201ENSMUST00000125165 1119 ntBASIC19.46■□□□□ 0.71
Rtp4Q9ER80 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC19.46■□□□□ 0.71
Rtp4Q9ER80 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Rtp4Q9ER80 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC19.46■□□□□ 0.71
Rtp4Q9ER80 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC19.46■□□□□ 0.71
Rtp4Q9ER80 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Rtp4Q9ER80 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC19.46■□□□□ 0.71
Rtp4Q9ER80 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Rtp4Q9ER80 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Rtp4Q9ER80 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Rtp4Q9ER80 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Rtp4Q9ER80 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
Rtp4Q9ER80 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Rtp4Q9ER80 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC19.45■□□□□ 0.7
Rtp4Q9ER80 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Rtp4Q9ER80 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC19.45■□□□□ 0.7
Rtp4Q9ER80 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Rtp4Q9ER80 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Rtp4Q9ER80 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Rtp4Q9ER80 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Rtp4Q9ER80 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC19.44■□□□□ 0.7
Rtp4Q9ER80 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Rtp4Q9ER80 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Rtp4Q9ER80 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Rtp4Q9ER80 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC19.44■□□□□ 0.7
Rtp4Q9ER80 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Rtp4Q9ER80 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC19.44■□□□□ 0.7
Rtp4Q9ER80 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 72.4 ms