Protein–RNA interactions for Protein: Q8VHY0

Cspg4, Chondroitin sulfate proteoglycan 4, mousemouse

Predictions only

Length 2,327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cspg4Q8VHY0 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
Cspg4Q8VHY0 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC18.22■□□□□ 0.51
Cspg4Q8VHY0 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC18.22■□□□□ 0.51
Cspg4Q8VHY0 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC18.22■□□□□ 0.51
Cspg4Q8VHY0 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
Cspg4Q8VHY0 Gm8493-201ENSMUST00000196881 489 ntBASIC18.21■□□□□ 0.51
Cspg4Q8VHY0 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC18.21■□□□□ 0.51
Cspg4Q8VHY0 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Cspg4Q8VHY0 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Cspg4Q8VHY0 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
Cspg4Q8VHY0 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Cspg4Q8VHY0 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC18.21■□□□□ 0.51
Cspg4Q8VHY0 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Cspg4Q8VHY0 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cspg4Q8VHY0 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
Cspg4Q8VHY0 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cspg4Q8VHY0 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC18.2■□□□□ 0.5
Cspg4Q8VHY0 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC18.2■□□□□ 0.5
Cspg4Q8VHY0 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cspg4Q8VHY0 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cspg4Q8VHY0 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cspg4Q8VHY0 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC18.2■□□□□ 0.5
Cspg4Q8VHY0 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cspg4Q8VHY0 Gm43173-201ENSMUST00000202246 593 ntBASIC18.2■□□□□ 0.5
Cspg4Q8VHY0 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Cspg4Q8VHY0 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cspg4Q8VHY0 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cspg4Q8VHY0 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC18.19■□□□□ 0.5
Cspg4Q8VHY0 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Cspg4Q8VHY0 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cspg4Q8VHY0 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC18.19■□□□□ 0.5
Cspg4Q8VHY0 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC18.19■□□□□ 0.5
Cspg4Q8VHY0 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cspg4Q8VHY0 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
Cspg4Q8VHY0 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cspg4Q8VHY0 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cspg4Q8VHY0 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Cspg4Q8VHY0 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cspg4Q8VHY0 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Cspg4Q8VHY0 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cspg4Q8VHY0 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Cspg4Q8VHY0 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cspg4Q8VHY0 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC18.18■□□□□ 0.5
Cspg4Q8VHY0 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Cspg4Q8VHY0 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Cspg4Q8VHY0 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC18.17■□□□□ 0.5
Cspg4Q8VHY0 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Cspg4Q8VHY0 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Cspg4Q8VHY0 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cspg4Q8VHY0 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC18.17■□□□□ 0.5
Cspg4Q8VHY0 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC18.17■□□□□ 0.5
Cspg4Q8VHY0 AC158990.1-201ENSMUST00000221450 2016 ntBASIC18.17■□□□□ 0.5
Cspg4Q8VHY0 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Cspg4Q8VHY0 Gm8770-201ENSMUST00000121113 1109 ntBASIC18.17■□□□□ 0.5
Cspg4Q8VHY0 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC18.17■□□□□ 0.5
Cspg4Q8VHY0 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cspg4Q8VHY0 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC18.16■□□□□ 0.5
Cspg4Q8VHY0 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cspg4Q8VHY0 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cspg4Q8VHY0 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Cspg4Q8VHY0 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC18.16■□□□□ 0.5
Cspg4Q8VHY0 Krt8-ps-201ENSMUST00000208495 945 ntBASIC18.16■□□□□ 0.5
Cspg4Q8VHY0 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cspg4Q8VHY0 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cspg4Q8VHY0 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Cspg4Q8VHY0 Cdc34b-202ENSMUST00000188741 1252 ntBASIC18.16■□□□□ 0.5
Cspg4Q8VHY0 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cspg4Q8VHY0 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Cspg4Q8VHY0 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cspg4Q8VHY0 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cspg4Q8VHY0 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Cspg4Q8VHY0 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
Cspg4Q8VHY0 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cspg4Q8VHY0 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cspg4Q8VHY0 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC18.15■□□□□ 0.5
Cspg4Q8VHY0 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cspg4Q8VHY0 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Cspg4Q8VHY0 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC18.15■□□□□ 0.5
Cspg4Q8VHY0 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Cspg4Q8VHY0 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
Cspg4Q8VHY0 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC18.14■□□□□ 0.49
Cspg4Q8VHY0 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Cspg4Q8VHY0 Gm12251-201ENSMUST00000117893 792 ntBASIC18.14■□□□□ 0.49
Cspg4Q8VHY0 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC18.14■□□□□ 0.49
Cspg4Q8VHY0 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC18.14■□□□□ 0.49
Cspg4Q8VHY0 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cspg4Q8VHY0 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cspg4Q8VHY0 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC18.14■□□□□ 0.49
Cspg4Q8VHY0 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Cspg4Q8VHY0 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cspg4Q8VHY0 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cspg4Q8VHY0 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
Cspg4Q8VHY0 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cspg4Q8VHY0 Gm6934-201ENSMUST00000194780 1905 ntBASIC18.13■□□□□ 0.49
Cspg4Q8VHY0 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cspg4Q8VHY0 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Cspg4Q8VHY0 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cspg4Q8VHY0 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
Cspg4Q8VHY0 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Cspg4Q8VHY0 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC18.12■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 34.8 ms