Protein–RNA interactions for Protein: Q8CG80

Shf, SH2 domain-containing adapter protein F, mousemouse

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShfQ8CG80 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ShfQ8CG80 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ShfQ8CG80 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ShfQ8CG80 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ShfQ8CG80 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ShfQ8CG80 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ShfQ8CG80 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
ShfQ8CG80 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
ShfQ8CG80 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ShfQ8CG80 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ShfQ8CG80 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
ShfQ8CG80 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
ShfQ8CG80 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC18.65■□□□□ 0.58
ShfQ8CG80 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ShfQ8CG80 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
ShfQ8CG80 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
ShfQ8CG80 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
ShfQ8CG80 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ShfQ8CG80 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ShfQ8CG80 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ShfQ8CG80 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ShfQ8CG80 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ShfQ8CG80 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ShfQ8CG80 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
ShfQ8CG80 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ShfQ8CG80 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
ShfQ8CG80 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ShfQ8CG80 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ShfQ8CG80 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
ShfQ8CG80 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ShfQ8CG80 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
ShfQ8CG80 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ShfQ8CG80 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
ShfQ8CG80 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ShfQ8CG80 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
ShfQ8CG80 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ShfQ8CG80 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
ShfQ8CG80 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ShfQ8CG80 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ShfQ8CG80 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ShfQ8CG80 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
ShfQ8CG80 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
ShfQ8CG80 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
ShfQ8CG80 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ShfQ8CG80 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ShfQ8CG80 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ShfQ8CG80 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
ShfQ8CG80 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ShfQ8CG80 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
ShfQ8CG80 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
ShfQ8CG80 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
ShfQ8CG80 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ShfQ8CG80 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
ShfQ8CG80 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
ShfQ8CG80 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC18.59■□□□□ 0.57
ShfQ8CG80 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
ShfQ8CG80 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
ShfQ8CG80 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
ShfQ8CG80 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
ShfQ8CG80 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC18.59■□□□□ 0.57
ShfQ8CG80 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
ShfQ8CG80 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC18.59■□□□□ 0.57
ShfQ8CG80 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
ShfQ8CG80 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
ShfQ8CG80 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
ShfQ8CG80 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
ShfQ8CG80 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
ShfQ8CG80 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC18.58■□□□□ 0.56
ShfQ8CG80 AC124392.1-201ENSMUST00000225172 5324 ntBASIC18.58■□□□□ 0.56
ShfQ8CG80 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
ShfQ8CG80 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
ShfQ8CG80 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
ShfQ8CG80 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
ShfQ8CG80 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
ShfQ8CG80 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
ShfQ8CG80 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
ShfQ8CG80 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
ShfQ8CG80 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
ShfQ8CG80 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC18.57■□□□□ 0.56
ShfQ8CG80 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
ShfQ8CG80 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
ShfQ8CG80 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
ShfQ8CG80 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
ShfQ8CG80 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC18.57■□□□□ 0.56
ShfQ8CG80 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
ShfQ8CG80 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
ShfQ8CG80 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
ShfQ8CG80 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC18.56■□□□□ 0.56
ShfQ8CG80 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
ShfQ8CG80 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
ShfQ8CG80 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
ShfQ8CG80 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
ShfQ8CG80 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
ShfQ8CG80 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
ShfQ8CG80 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC18.55■□□□□ 0.56
ShfQ8CG80 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
ShfQ8CG80 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
ShfQ8CG80 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC18.55■□□□□ 0.56
ShfQ8CG80 Gm10420-201ENSMUST00000121713 882 ntBASIC18.55■□□□□ 0.56
ShfQ8CG80 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 32.7 ms