Protein–RNA interactions for Protein: Q8BX13

Ube3d, E3 ubiquitin-protein ligase E3D, mousemouse

Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3dQ8BX13 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC18.48■□□□□ 0.55
Ube3dQ8BX13 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC18.48■□□□□ 0.55
Ube3dQ8BX13 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Ube3dQ8BX13 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Ube3dQ8BX13 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC18.48■□□□□ 0.55
Ube3dQ8BX13 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Ube3dQ8BX13 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
Ube3dQ8BX13 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Ube3dQ8BX13 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
Ube3dQ8BX13 AC115037.1-201ENSMUST00000223391 2173 ntBASIC18.47■□□□□ 0.55
Ube3dQ8BX13 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ube3dQ8BX13 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
Ube3dQ8BX13 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ube3dQ8BX13 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ube3dQ8BX13 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ube3dQ8BX13 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
Ube3dQ8BX13 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
Ube3dQ8BX13 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Ube3dQ8BX13 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
Ube3dQ8BX13 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
Ube3dQ8BX13 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Ube3dQ8BX13 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC18.46■□□□□ 0.54
Ube3dQ8BX13 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
Ube3dQ8BX13 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Ube3dQ8BX13 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Ube3dQ8BX13 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Ube3dQ8BX13 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Ube3dQ8BX13 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Ube3dQ8BX13 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Ube3dQ8BX13 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Ube3dQ8BX13 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Ube3dQ8BX13 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Ube3dQ8BX13 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Ube3dQ8BX13 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC18.44■□□□□ 0.54
Ube3dQ8BX13 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
Ube3dQ8BX13 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Ube3dQ8BX13 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Ube3dQ8BX13 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
Ube3dQ8BX13 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Ube3dQ8BX13 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Ube3dQ8BX13 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Ube3dQ8BX13 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
Ube3dQ8BX13 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC18.44■□□□□ 0.54
Ube3dQ8BX13 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
Ube3dQ8BX13 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC18.43■□□□□ 0.54
Ube3dQ8BX13 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Ube3dQ8BX13 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Ube3dQ8BX13 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
Ube3dQ8BX13 AC124392.1-201ENSMUST00000225172 5324 ntBASIC18.42■□□□□ 0.54
Ube3dQ8BX13 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Ube3dQ8BX13 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Ube3dQ8BX13 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC18.42■□□□□ 0.54
Ube3dQ8BX13 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
Ube3dQ8BX13 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Ube3dQ8BX13 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC18.42■□□□□ 0.54
Ube3dQ8BX13 Gm45102-201ENSMUST00000207427 857 ntBASIC18.42■□□□□ 0.54
Ube3dQ8BX13 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Ube3dQ8BX13 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Ube3dQ8BX13 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Ube3dQ8BX13 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Ube3dQ8BX13 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Ube3dQ8BX13 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
Ube3dQ8BX13 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
Ube3dQ8BX13 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ube3dQ8BX13 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ube3dQ8BX13 Gm16464-201ENSMUST00000117815 1095 ntBASIC18.41■□□□□ 0.54
Ube3dQ8BX13 Gm14117-201ENSMUST00000122417 843 ntBASIC18.41■□□□□ 0.54
Ube3dQ8BX13 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC18.41■□□□□ 0.54
Ube3dQ8BX13 Gm9959-201ENSMUST00000068277 390 ntBASIC18.41■□□□□ 0.54
Ube3dQ8BX13 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ube3dQ8BX13 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ube3dQ8BX13 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC18.4■□□□□ 0.54
Ube3dQ8BX13 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ube3dQ8BX13 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ube3dQ8BX13 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Ube3dQ8BX13 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC18.4■□□□□ 0.54
Ube3dQ8BX13 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ube3dQ8BX13 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ube3dQ8BX13 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ube3dQ8BX13 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ube3dQ8BX13 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
Ube3dQ8BX13 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.54
Ube3dQ8BX13 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ube3dQ8BX13 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ube3dQ8BX13 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ube3dQ8BX13 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ube3dQ8BX13 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC18.39■□□□□ 0.53
Ube3dQ8BX13 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
Ube3dQ8BX13 Gm28536-201ENSMUST00000190971 1317 ntBASIC18.39■□□□□ 0.53
Ube3dQ8BX13 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ube3dQ8BX13 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ube3dQ8BX13 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ube3dQ8BX13 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Ube3dQ8BX13 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ube3dQ8BX13 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Ube3dQ8BX13 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
Ube3dQ8BX13 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ube3dQ8BX13 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
Ube3dQ8BX13 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ube3dQ8BX13 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 17.3 ms