Protein–RNA interactions for Protein: Q80WG7

Trim36, E3 ubiquitin-protein ligase Trim36, mousemouse

Predictions only

Length 729 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim36Q80WG7 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC20.05■□□□□ 0.8
Trim36Q80WG7 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Trim36Q80WG7 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
Trim36Q80WG7 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC20.05■□□□□ 0.8
Trim36Q80WG7 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
Trim36Q80WG7 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Trim36Q80WG7 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Trim36Q80WG7 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC20.04■□□□□ 0.8
Trim36Q80WG7 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC20.04■□□□□ 0.8
Trim36Q80WG7 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Trim36Q80WG7 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC20.04■□□□□ 0.8
Trim36Q80WG7 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Trim36Q80WG7 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Trim36Q80WG7 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Trim36Q80WG7 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Trim36Q80WG7 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
Trim36Q80WG7 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Trim36Q80WG7 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Trim36Q80WG7 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Trim36Q80WG7 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC20.03■□□□□ 0.8
Trim36Q80WG7 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Trim36Q80WG7 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
Trim36Q80WG7 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Trim36Q80WG7 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Trim36Q80WG7 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Trim36Q80WG7 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Trim36Q80WG7 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Trim36Q80WG7 Gm13238-201ENSMUST00000117655 780 ntBASIC20.02■□□□□ 0.8
Trim36Q80WG7 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
Trim36Q80WG7 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.79
Trim36Q80WG7 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Trim36Q80WG7 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Trim36Q80WG7 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
Trim36Q80WG7 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Trim36Q80WG7 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
Trim36Q80WG7 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Trim36Q80WG7 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
Trim36Q80WG7 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Trim36Q80WG7 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
Trim36Q80WG7 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Trim36Q80WG7 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Trim36Q80WG7 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC20■□□□□ 0.79
Trim36Q80WG7 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC20■□□□□ 0.79
Trim36Q80WG7 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Trim36Q80WG7 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Trim36Q80WG7 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC20■□□□□ 0.79
Trim36Q80WG7 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC20■□□□□ 0.79
Trim36Q80WG7 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC20■□□□□ 0.79
Trim36Q80WG7 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Trim36Q80WG7 Nsd1-203ENSMUST00000224156 1149 ntBASIC19.99■□□□□ 0.79
Trim36Q80WG7 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Trim36Q80WG7 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
Trim36Q80WG7 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
Trim36Q80WG7 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Trim36Q80WG7 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Trim36Q80WG7 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC19.98■□□□□ 0.79
Trim36Q80WG7 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC19.98■□□□□ 0.79
Trim36Q80WG7 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC19.97■□□□□ 0.79
Trim36Q80WG7 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Trim36Q80WG7 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC19.97■□□□□ 0.79
Trim36Q80WG7 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Trim36Q80WG7 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Trim36Q80WG7 Gm15546-201ENSMUST00000122095 826 ntBASIC19.97■□□□□ 0.79
Trim36Q80WG7 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Trim36Q80WG7 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Trim36Q80WG7 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC19.97■□□□□ 0.79
Trim36Q80WG7 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Trim36Q80WG7 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Trim36Q80WG7 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Trim36Q80WG7 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Trim36Q80WG7 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Trim36Q80WG7 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC19.96■□□□□ 0.79
Trim36Q80WG7 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
Trim36Q80WG7 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Trim36Q80WG7 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Trim36Q80WG7 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Trim36Q80WG7 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Trim36Q80WG7 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Trim36Q80WG7 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC19.95■□□□□ 0.78
Trim36Q80WG7 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC19.95■□□□□ 0.78
Trim36Q80WG7 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Trim36Q80WG7 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC19.95■□□□□ 0.78
Trim36Q80WG7 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Trim36Q80WG7 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
Trim36Q80WG7 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Trim36Q80WG7 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Trim36Q80WG7 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Trim36Q80WG7 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC19.94■□□□□ 0.78
Trim36Q80WG7 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC19.94■□□□□ 0.78
Trim36Q80WG7 Gm5522-201ENSMUST00000189483 1242 ntBASIC19.94■□□□□ 0.78
Trim36Q80WG7 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Trim36Q80WG7 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Trim36Q80WG7 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Trim36Q80WG7 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Trim36Q80WG7 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Trim36Q80WG7 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Trim36Q80WG7 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Trim36Q80WG7 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Trim36Q80WG7 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC19.93■□□□□ 0.78
Trim36Q80WG7 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC19.93■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 106.8 ms