Protein–RNA interactions for Protein: Q6Q899

Ddx58, Probable ATP-dependent RNA helicase DDX58, mousemouse

Predictions only

Length 926 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx58Q6Q899 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC26.08■■□□□ 1.77
Ddx58Q6Q899 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
Ddx58Q6Q899 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC26.08■■□□□ 1.77
Ddx58Q6Q899 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC26.08■■□□□ 1.77
Ddx58Q6Q899 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC26.08■■□□□ 1.76
Ddx58Q6Q899 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC26.07■■□□□ 1.76
Ddx58Q6Q899 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
Ddx58Q6Q899 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC26.07■■□□□ 1.76
Ddx58Q6Q899 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC26.07■■□□□ 1.76
Ddx58Q6Q899 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
Ddx58Q6Q899 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
Ddx58Q6Q899 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC26.06■■□□□ 1.76
Ddx58Q6Q899 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
Ddx58Q6Q899 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC26.05■■□□□ 1.76
Ddx58Q6Q899 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC26.05■■□□□ 1.76
Ddx58Q6Q899 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
Ddx58Q6Q899 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
Ddx58Q6Q899 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
Ddx58Q6Q899 AC140930.3-201ENSMUST00000222935 274 ntBASIC26.04■■□□□ 1.76
Ddx58Q6Q899 Gm9870-201ENSMUST00000063874 645 ntBASIC26.04■■□□□ 1.76
Ddx58Q6Q899 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC26.04■■□□□ 1.76
Ddx58Q6Q899 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC26.04■■□□□ 1.76
Ddx58Q6Q899 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
Ddx58Q6Q899 Kdm3b-204ENSMUST00000224715 2032 ntBASIC26.04■■□□□ 1.76
Ddx58Q6Q899 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC26.03■■□□□ 1.76
Ddx58Q6Q899 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC26.03■■□□□ 1.76
Ddx58Q6Q899 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC26.03■■□□□ 1.76
Ddx58Q6Q899 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
Ddx58Q6Q899 Gm4430-201ENSMUST00000192413 1943 ntBASIC26.03■■□□□ 1.76
Ddx58Q6Q899 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC26.03■■□□□ 1.76
Ddx58Q6Q899 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
Ddx58Q6Q899 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC26.02■■□□□ 1.76
Ddx58Q6Q899 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
Ddx58Q6Q899 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
Ddx58Q6Q899 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
Ddx58Q6Q899 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
Ddx58Q6Q899 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
Ddx58Q6Q899 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC26.01■■□□□ 1.75
Ddx58Q6Q899 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC26.01■■□□□ 1.75
Ddx58Q6Q899 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC26.01■■□□□ 1.75
Ddx58Q6Q899 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC26■■□□□ 1.75
Ddx58Q6Q899 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
Ddx58Q6Q899 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC26■■□□□ 1.75
Ddx58Q6Q899 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
Ddx58Q6Q899 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
Ddx58Q6Q899 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC26■■□□□ 1.75
Ddx58Q6Q899 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
Ddx58Q6Q899 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
Ddx58Q6Q899 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC25.99■■□□□ 1.75
Ddx58Q6Q899 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC25.99■■□□□ 1.75
Ddx58Q6Q899 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC25.99■■□□□ 1.75
Ddx58Q6Q899 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC25.99■■□□□ 1.75
Ddx58Q6Q899 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC25.99■■□□□ 1.75
Ddx58Q6Q899 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
Ddx58Q6Q899 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
Ddx58Q6Q899 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC25.98■■□□□ 1.75
Ddx58Q6Q899 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
Ddx58Q6Q899 Gm42418-201ENSMUST00000182010 1831 ntBASIC25.98■■□□□ 1.75
Ddx58Q6Q899 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC25.97■■□□□ 1.75
Ddx58Q6Q899 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC25.97■■□□□ 1.75
Ddx58Q6Q899 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
Ddx58Q6Q899 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC25.97■■□□□ 1.75
Ddx58Q6Q899 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC25.97■■□□□ 1.75
Ddx58Q6Q899 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC25.97■■□□□ 1.75
Ddx58Q6Q899 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC25.96■■□□□ 1.75
Ddx58Q6Q899 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC25.95■■□□□ 1.75
Ddx58Q6Q899 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC25.95■■□□□ 1.75
Ddx58Q6Q899 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC25.95■■□□□ 1.74
Ddx58Q6Q899 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC25.95■■□□□ 1.74
Ddx58Q6Q899 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
Ddx58Q6Q899 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC25.94■■□□□ 1.74
Ddx58Q6Q899 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC25.94■■□□□ 1.74
Ddx58Q6Q899 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC25.94■■□□□ 1.74
Ddx58Q6Q899 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
Ddx58Q6Q899 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
Ddx58Q6Q899 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC25.94■■□□□ 1.74
Ddx58Q6Q899 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC25.94■■□□□ 1.74
Ddx58Q6Q899 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC25.94■■□□□ 1.74
Ddx58Q6Q899 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
Ddx58Q6Q899 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC25.93■■□□□ 1.74
Ddx58Q6Q899 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC25.93■■□□□ 1.74
Ddx58Q6Q899 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC25.93■■□□□ 1.74
Ddx58Q6Q899 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
Ddx58Q6Q899 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC25.93■■□□□ 1.74
Ddx58Q6Q899 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
Ddx58Q6Q899 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC25.93■■□□□ 1.74
Ddx58Q6Q899 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
Ddx58Q6Q899 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC25.93■■□□□ 1.74
Ddx58Q6Q899 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC25.93■■□□□ 1.74
Ddx58Q6Q899 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
Ddx58Q6Q899 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC25.92■■□□□ 1.74
Ddx58Q6Q899 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC25.92■■□□□ 1.74
Ddx58Q6Q899 Appbp2os-202ENSMUST00000206972 447 ntBASIC25.92■■□□□ 1.74
Ddx58Q6Q899 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC25.91■■□□□ 1.74
Ddx58Q6Q899 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC25.91■■□□□ 1.74
Ddx58Q6Q899 Gm12821-201ENSMUST00000120022 600 ntBASIC25.91■■□□□ 1.74
Ddx58Q6Q899 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC25.91■■□□□ 1.74
Ddx58Q6Q899 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC25.91■■□□□ 1.74
Ddx58Q6Q899 Gm7143-201ENSMUST00000222811 859 ntBASIC25.91■■□□□ 1.74
Ddx58Q6Q899 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC25.91■■□□□ 1.74
Retrieved 100 of 76,532 protein–RNA pairs in 27.2 ms