Protein–RNA interactions for Protein: Q62388

Atm, Serine-protein kinase ATM, mousemouse

Predictions only

Length 3,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AtmQ62388 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
AtmQ62388 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC20.25■□□□□ 0.83
AtmQ62388 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
AtmQ62388 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
AtmQ62388 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
AtmQ62388 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
AtmQ62388 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
AtmQ62388 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC20.24■□□□□ 0.83
AtmQ62388 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
AtmQ62388 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
AtmQ62388 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
AtmQ62388 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
AtmQ62388 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
AtmQ62388 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC20.23■□□□□ 0.83
AtmQ62388 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
AtmQ62388 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
AtmQ62388 Gm10620-201ENSMUST00000098379 1332 ntBASIC20.23■□□□□ 0.83
AtmQ62388 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
AtmQ62388 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
AtmQ62388 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
AtmQ62388 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
AtmQ62388 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
AtmQ62388 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
AtmQ62388 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
AtmQ62388 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
AtmQ62388 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
AtmQ62388 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
AtmQ62388 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC20.22■□□□□ 0.83
AtmQ62388 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC20.21■□□□□ 0.83
AtmQ62388 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC20.21■□□□□ 0.83
AtmQ62388 Gm8493-201ENSMUST00000196881 489 ntBASIC20.21■□□□□ 0.83
AtmQ62388 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
AtmQ62388 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
AtmQ62388 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
AtmQ62388 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
AtmQ62388 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
AtmQ62388 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
AtmQ62388 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC20.2■□□□□ 0.82
AtmQ62388 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
AtmQ62388 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC20.2■□□□□ 0.82
AtmQ62388 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
AtmQ62388 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
AtmQ62388 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
AtmQ62388 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
AtmQ62388 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
AtmQ62388 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC20.19■□□□□ 0.82
AtmQ62388 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
AtmQ62388 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
AtmQ62388 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
AtmQ62388 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC20.18■□□□□ 0.82
AtmQ62388 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
AtmQ62388 Gm6934-201ENSMUST00000194780 1905 ntBASIC20.18■□□□□ 0.82
AtmQ62388 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
AtmQ62388 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
AtmQ62388 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC20.18■□□□□ 0.82
AtmQ62388 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
AtmQ62388 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
AtmQ62388 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
AtmQ62388 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
AtmQ62388 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
AtmQ62388 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC20.18■□□□□ 0.82
AtmQ62388 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC20.17■□□□□ 0.82
AtmQ62388 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
AtmQ62388 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC20.17■□□□□ 0.82
AtmQ62388 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
AtmQ62388 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
AtmQ62388 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC20.16■□□□□ 0.82
AtmQ62388 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
AtmQ62388 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
AtmQ62388 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC20.16■□□□□ 0.82
AtmQ62388 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
AtmQ62388 Gm12251-201ENSMUST00000117893 792 ntBASIC20.16■□□□□ 0.82
AtmQ62388 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
AtmQ62388 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
AtmQ62388 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
AtmQ62388 AC099934.2-201ENSMUST00000196389 70 ntBASIC20.15■□□□□ 0.82
AtmQ62388 AC156953.1-201ENSMUST00000196953 70 ntBASIC20.15■□□□□ 0.82
AtmQ62388 AC157822.2-201ENSMUST00000200291 70 ntBASIC20.15■□□□□ 0.82
AtmQ62388 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
AtmQ62388 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
AtmQ62388 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
AtmQ62388 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
AtmQ62388 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
AtmQ62388 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.82
AtmQ62388 Cdc34b-202ENSMUST00000188741 1252 ntBASIC20.14■□□□□ 0.82
AtmQ62388 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
AtmQ62388 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC20.14■□□□□ 0.82
AtmQ62388 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.82
AtmQ62388 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
AtmQ62388 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
AtmQ62388 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
AtmQ62388 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
AtmQ62388 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC20.13■□□□□ 0.81
AtmQ62388 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
AtmQ62388 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
AtmQ62388 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
AtmQ62388 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC20.13■□□□□ 0.81
AtmQ62388 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
AtmQ62388 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
AtmQ62388 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC20.12■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 15 ms