Protein–RNA interactions for Protein: Q3U1D9

UPF0602 protein C4orf47 homolog, mousemouse

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q3U1D9 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Q3U1D9 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC18.17■□□□□ 0.5
Q3U1D9 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Q3U1D9 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Q3U1D9 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Q3U1D9 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Q3U1D9 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Q3U1D9 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Q3U1D9 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Q3U1D9 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Q3U1D9 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Q3U1D9 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC18.16■□□□□ 0.5
Q3U1D9 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC18.16■□□□□ 0.5
Q3U1D9 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Q3U1D9 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Q3U1D9 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Q3U1D9 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Q3U1D9 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Q3U1D9 AC115037.1-201ENSMUST00000223391 2173 ntBASIC18.15■□□□□ 0.5
Q3U1D9 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Q3U1D9 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Q3U1D9 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC18.15■□□□□ 0.5
Q3U1D9 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Q3U1D9 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC18.15■□□□□ 0.5
Q3U1D9 Golgb1-201ENSMUST00000023534 498 ntBASIC18.15■□□□□ 0.5
Q3U1D9 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Q3U1D9 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Q3U1D9 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC18.14■□□□□ 0.49
Q3U1D9 Gm21956-201ENSMUST00000179946 522 ntBASIC18.14■□□□□ 0.49
Q3U1D9 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Q3U1D9 AC140930.3-201ENSMUST00000222935 274 ntBASIC18.14■□□□□ 0.49
Q3U1D9 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
Q3U1D9 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Q3U1D9 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Q3U1D9 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Q3U1D9 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Q3U1D9 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Q3U1D9 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Q3U1D9 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC18.13■□□□□ 0.49
Q3U1D9 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC18.13■□□□□ 0.49
Q3U1D9 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Q3U1D9 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Q3U1D9 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Q3U1D9 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Q3U1D9 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Q3U1D9 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Q3U1D9 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
Q3U1D9 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Q3U1D9 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Q3U1D9 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Q3U1D9 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC18.12■□□□□ 0.49
Q3U1D9 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
Q3U1D9 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Q3U1D9 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Q3U1D9 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC18.11■□□□□ 0.49
Q3U1D9 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
Q3U1D9 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Q3U1D9 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC18.1■□□□□ 0.49
Q3U1D9 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC18.1■□□□□ 0.49
Q3U1D9 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Q3U1D9 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC18.1■□□□□ 0.49
Q3U1D9 Gm12821-201ENSMUST00000120022 600 ntBASIC18.1■□□□□ 0.49
Q3U1D9 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
Q3U1D9 Appbp2os-202ENSMUST00000206972 447 ntBASIC18.1■□□□□ 0.49
Q3U1D9 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Q3U1D9 Gm9870-201ENSMUST00000063874 645 ntBASIC18.1■□□□□ 0.49
Q3U1D9 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Q3U1D9 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Q3U1D9 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Q3U1D9 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC18.09■□□□□ 0.49
Q3U1D9 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC18.09■□□□□ 0.49
Q3U1D9 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Q3U1D9 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Q3U1D9 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC18.08■□□□□ 0.49
Q3U1D9 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.49
Q3U1D9 H3f3aos-201ENSMUST00000097448 2905 ntBASIC18.08■□□□□ 0.49
Q3U1D9 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC18.08■□□□□ 0.48
Q3U1D9 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Q3U1D9 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC18.08■□□□□ 0.48
Q3U1D9 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.48
Q3U1D9 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Q3U1D9 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC18.08■□□□□ 0.48
Q3U1D9 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Q3U1D9 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Q3U1D9 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC18.08■□□□□ 0.48
Q3U1D9 Gm17641-201ENSMUST00000166328 2350 ntBASIC18.08■□□□□ 0.48
Q3U1D9 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Q3U1D9 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC18.07■□□□□ 0.48
Q3U1D9 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Q3U1D9 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Q3U1D9 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC18.07■□□□□ 0.48
Q3U1D9 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Q3U1D9 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC18.07■□□□□ 0.48
Q3U1D9 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
Q3U1D9 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Q3U1D9 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
Q3U1D9 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC18.07■□□□□ 0.48
Q3U1D9 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Q3U1D9 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC18.07■□□□□ 0.48
Q3U1D9 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC18.07■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 26.2 ms