Protein–RNA interactions for Protein: P63154

Crnkl1, Crooked neck-like protein 1, mousemouse

Known RBP Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Crnkl1P63154 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Crnkl1P63154 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Crnkl1P63154 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
Crnkl1P63154 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
Crnkl1P63154 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Crnkl1P63154 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
Crnkl1P63154 Mir6538-201ENSMUST00000183713 110 ntBASIC20.52■□□□□ 0.88
Crnkl1P63154 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Crnkl1P63154 AC153911.1-201ENSMUST00000220378 758 ntBASIC20.52■□□□□ 0.88
Crnkl1P63154 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
Crnkl1P63154 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Crnkl1P63154 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Crnkl1P63154 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC20.52■□□□□ 0.87
Crnkl1P63154 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Crnkl1P63154 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Crnkl1P63154 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Crnkl1P63154 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC20.51■□□□□ 0.87
Crnkl1P63154 Gm16437-201ENSMUST00000025669 507 ntBASIC20.51■□□□□ 0.87
Crnkl1P63154 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Crnkl1P63154 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Crnkl1P63154 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
Crnkl1P63154 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Crnkl1P63154 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Crnkl1P63154 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC20.51■□□□□ 0.87
Crnkl1P63154 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Crnkl1P63154 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Crnkl1P63154 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Crnkl1P63154 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC20.5■□□□□ 0.87
Crnkl1P63154 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
Crnkl1P63154 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Crnkl1P63154 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Crnkl1P63154 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
Crnkl1P63154 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Crnkl1P63154 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
Crnkl1P63154 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
Crnkl1P63154 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Crnkl1P63154 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
Crnkl1P63154 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Crnkl1P63154 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Crnkl1P63154 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC20.48■□□□□ 0.87
Crnkl1P63154 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Crnkl1P63154 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Crnkl1P63154 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Crnkl1P63154 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
Crnkl1P63154 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Crnkl1P63154 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Crnkl1P63154 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Crnkl1P63154 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC20.46■□□□□ 0.87
Crnkl1P63154 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Crnkl1P63154 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Crnkl1P63154 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
Crnkl1P63154 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Crnkl1P63154 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Crnkl1P63154 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
Crnkl1P63154 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Crnkl1P63154 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Crnkl1P63154 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Crnkl1P63154 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Crnkl1P63154 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Crnkl1P63154 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Crnkl1P63154 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Crnkl1P63154 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
Crnkl1P63154 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
Crnkl1P63154 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Crnkl1P63154 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Crnkl1P63154 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Crnkl1P63154 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Crnkl1P63154 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
Crnkl1P63154 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Crnkl1P63154 Terc-201ENSMUST00000082862 423 ntBASIC20.44■□□□□ 0.86
Crnkl1P63154 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Crnkl1P63154 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Crnkl1P63154 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Crnkl1P63154 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Crnkl1P63154 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Crnkl1P63154 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Crnkl1P63154 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Crnkl1P63154 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Crnkl1P63154 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Crnkl1P63154 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Crnkl1P63154 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
Crnkl1P63154 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
Crnkl1P63154 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
Crnkl1P63154 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Crnkl1P63154 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Crnkl1P63154 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC20.41■□□□□ 0.86
Crnkl1P63154 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Crnkl1P63154 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Crnkl1P63154 Gm43403-201ENSMUST00000198011 1786 ntBASIC20.41■□□□□ 0.86
Crnkl1P63154 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Crnkl1P63154 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Crnkl1P63154 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC20.4■□□□□ 0.86
Crnkl1P63154 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Crnkl1P63154 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Crnkl1P63154 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC20.4■□□□□ 0.86
Crnkl1P63154 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Crnkl1P63154 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Crnkl1P63154 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC20.39■□□□□ 0.86
Crnkl1P63154 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Crnkl1P63154 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 17.2 ms