Protein–RNA interactions for Protein: P08122

Col4a2, Collagen alpha-2(IV) chain, mousemouse

Predictions only

Length 1,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a2P08122 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Col4a2P08122 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Col4a2P08122 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC19.88■□□□□ 0.77
Col4a2P08122 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC19.88■□□□□ 0.77
Col4a2P08122 AC115037.1-201ENSMUST00000223391 2173 ntBASIC19.88■□□□□ 0.77
Col4a2P08122 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Col4a2P08122 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
Col4a2P08122 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
Col4a2P08122 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Col4a2P08122 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
Col4a2P08122 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
Col4a2P08122 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Col4a2P08122 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Col4a2P08122 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
Col4a2P08122 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Col4a2P08122 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Col4a2P08122 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Col4a2P08122 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC19.86■□□□□ 0.77
Col4a2P08122 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
Col4a2P08122 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Col4a2P08122 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC19.86■□□□□ 0.77
Col4a2P08122 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
Col4a2P08122 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
Col4a2P08122 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Col4a2P08122 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Col4a2P08122 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Col4a2P08122 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Col4a2P08122 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Col4a2P08122 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Col4a2P08122 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
Col4a2P08122 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Col4a2P08122 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC19.85■□□□□ 0.77
Col4a2P08122 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Col4a2P08122 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Col4a2P08122 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
Col4a2P08122 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC19.85■□□□□ 0.77
Col4a2P08122 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Col4a2P08122 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Col4a2P08122 Gm8495-201ENSMUST00000188740 694 ntBASIC19.84■□□□□ 0.77
Col4a2P08122 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Col4a2P08122 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC19.84■□□□□ 0.77
Col4a2P08122 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Col4a2P08122 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Col4a2P08122 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Col4a2P08122 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Col4a2P08122 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Col4a2P08122 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Col4a2P08122 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
Col4a2P08122 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
Col4a2P08122 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Col4a2P08122 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Col4a2P08122 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Col4a2P08122 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC19.82■□□□□ 0.76
Col4a2P08122 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Col4a2P08122 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Col4a2P08122 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Col4a2P08122 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Col4a2P08122 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC19.82■□□□□ 0.76
Col4a2P08122 Gm6139-201ENSMUST00000079261 882 ntBASIC19.82■□□□□ 0.76
Col4a2P08122 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Col4a2P08122 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC19.82■□□□□ 0.76
Col4a2P08122 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Col4a2P08122 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Col4a2P08122 Flvcr1-202ENSMUST00000191946 1216 ntBASIC19.81■□□□□ 0.76
Col4a2P08122 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Col4a2P08122 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Col4a2P08122 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Col4a2P08122 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC19.8■□□□□ 0.76
Col4a2P08122 H3f3aos-201ENSMUST00000097448 2905 ntBASIC19.8■□□□□ 0.76
Col4a2P08122 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
Col4a2P08122 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
Col4a2P08122 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC19.8■□□□□ 0.76
Col4a2P08122 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Col4a2P08122 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC19.8■□□□□ 0.76
Col4a2P08122 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
Col4a2P08122 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Col4a2P08122 AC116713.1-201ENSMUST00000215074 430 ntBASIC19.8■□□□□ 0.76
Col4a2P08122 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Col4a2P08122 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Col4a2P08122 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
Col4a2P08122 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
Col4a2P08122 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Col4a2P08122 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Col4a2P08122 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Col4a2P08122 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
Col4a2P08122 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Col4a2P08122 Gm43017-201ENSMUST00000198296 752 ntBASIC19.79■□□□□ 0.76
Col4a2P08122 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Col4a2P08122 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC19.78■□□□□ 0.76
Col4a2P08122 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC19.78■□□□□ 0.76
Col4a2P08122 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Col4a2P08122 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Col4a2P08122 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC19.77■□□□□ 0.76
Col4a2P08122 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Col4a2P08122 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Col4a2P08122 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Col4a2P08122 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Col4a2P08122 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
Col4a2P08122 Gm17641-201ENSMUST00000166328 2350 ntBASIC19.76■□□□□ 0.75
Col4a2P08122 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 17 ms