Protein–RNA interactions for Protein: O88544

Cops4, COP9 signalosome complex subunit 4, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops4O88544 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC19.2■□□□□ 0.66
Cops4O88544 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
Cops4O88544 Gm9806-201ENSMUST00000051080 552 ntBASIC19.19■□□□□ 0.66
Cops4O88544 Iqck-206ENSMUST00000208658 2891 ntBASIC19.19■□□□□ 0.66
Cops4O88544 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cops4O88544 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Cops4O88544 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cops4O88544 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Cops4O88544 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC19.18■□□□□ 0.66
Cops4O88544 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Cops4O88544 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC19.18■□□□□ 0.66
Cops4O88544 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Cops4O88544 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cops4O88544 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cops4O88544 Gm10616-201ENSMUST00000205285 2127 ntBASIC19.18■□□□□ 0.66
Cops4O88544 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cops4O88544 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
Cops4O88544 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Cops4O88544 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC19.17■□□□□ 0.66
Cops4O88544 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC19.17■□□□□ 0.66
Cops4O88544 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cops4O88544 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Cops4O88544 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cops4O88544 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cops4O88544 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cops4O88544 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cops4O88544 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cops4O88544 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Cops4O88544 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cops4O88544 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cops4O88544 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cops4O88544 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cops4O88544 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Cops4O88544 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cops4O88544 Gm44428-201ENSMUST00000204474 874 ntBASIC19.16■□□□□ 0.66
Cops4O88544 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC19.16■□□□□ 0.66
Cops4O88544 Gm16437-201ENSMUST00000025669 507 ntBASIC19.16■□□□□ 0.66
Cops4O88544 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
Cops4O88544 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cops4O88544 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cops4O88544 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC19.16■□□□□ 0.66
Cops4O88544 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cops4O88544 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cops4O88544 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cops4O88544 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cops4O88544 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC19.15■□□□□ 0.66
Cops4O88544 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cops4O88544 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC19.15■□□□□ 0.66
Cops4O88544 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cops4O88544 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
Cops4O88544 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cops4O88544 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cops4O88544 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.66
Cops4O88544 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Cops4O88544 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Cops4O88544 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.66
Cops4O88544 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
Cops4O88544 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Cops4O88544 Gm11687-201ENSMUST00000118911 886 ntBASIC19.14■□□□□ 0.65
Cops4O88544 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
Cops4O88544 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Cops4O88544 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Cops4O88544 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Cops4O88544 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Cops4O88544 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Cops4O88544 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC19.14■□□□□ 0.65
Cops4O88544 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
Cops4O88544 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Cops4O88544 Snhg20-203ENSMUST00000182811 2153 ntBASIC19.13■□□□□ 0.65
Cops4O88544 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Cops4O88544 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Cops4O88544 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Cops4O88544 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Cops4O88544 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
Cops4O88544 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Cops4O88544 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
Cops4O88544 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Cops4O88544 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
Cops4O88544 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Cops4O88544 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC19.12■□□□□ 0.65
Cops4O88544 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
Cops4O88544 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Cops4O88544 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC19.11■□□□□ 0.65
Cops4O88544 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC19.11■□□□□ 0.65
Cops4O88544 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Cops4O88544 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Cops4O88544 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Cops4O88544 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Cops4O88544 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Cops4O88544 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Cops4O88544 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Cops4O88544 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
Cops4O88544 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC19.1■□□□□ 0.65
Cops4O88544 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Cops4O88544 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
Cops4O88544 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Cops4O88544 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
Cops4O88544 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Cops4O88544 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Cops4O88544 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 12.3 ms