Protein–RNA interactions for Protein: O88384

Vti1b, Vesicle transport through interaction with t-SNAREs homolog 1B, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vti1bO88384 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Vti1bO88384 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC19.8■□□□□ 0.76
Vti1bO88384 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Vti1bO88384 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Vti1bO88384 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Vti1bO88384 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Vti1bO88384 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Vti1bO88384 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Vti1bO88384 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
Vti1bO88384 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Vti1bO88384 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Vti1bO88384 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC19.79■□□□□ 0.76
Vti1bO88384 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
Vti1bO88384 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
Vti1bO88384 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC19.78■□□□□ 0.76
Vti1bO88384 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Vti1bO88384 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
Vti1bO88384 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC19.78■□□□□ 0.76
Vti1bO88384 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
Vti1bO88384 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Vti1bO88384 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Vti1bO88384 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
Vti1bO88384 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Vti1bO88384 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Vti1bO88384 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Vti1bO88384 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Vti1bO88384 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Vti1bO88384 Gm42418-201ENSMUST00000182010 1831 ntBASIC19.77■□□□□ 0.76
Vti1bO88384 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
Vti1bO88384 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Vti1bO88384 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Vti1bO88384 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
Vti1bO88384 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Vti1bO88384 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Vti1bO88384 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Vti1bO88384 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.75
Vti1bO88384 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Vti1bO88384 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Vti1bO88384 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Vti1bO88384 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC19.76■□□□□ 0.75
Vti1bO88384 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Vti1bO88384 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Vti1bO88384 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC19.76■□□□□ 0.75
Vti1bO88384 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Vti1bO88384 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
Vti1bO88384 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Vti1bO88384 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Vti1bO88384 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
Vti1bO88384 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Vti1bO88384 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
Vti1bO88384 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Vti1bO88384 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Vti1bO88384 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Vti1bO88384 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
Vti1bO88384 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
Vti1bO88384 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Vti1bO88384 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Vti1bO88384 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Vti1bO88384 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Vti1bO88384 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Vti1bO88384 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Vti1bO88384 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Vti1bO88384 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Vti1bO88384 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
Vti1bO88384 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Vti1bO88384 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Vti1bO88384 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Vti1bO88384 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Vti1bO88384 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Vti1bO88384 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC19.73■□□□□ 0.75
Vti1bO88384 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Vti1bO88384 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Vti1bO88384 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Vti1bO88384 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Vti1bO88384 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Vti1bO88384 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Vti1bO88384 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Vti1bO88384 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Vti1bO88384 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Vti1bO88384 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
Vti1bO88384 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Vti1bO88384 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Vti1bO88384 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Vti1bO88384 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Vti1bO88384 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Vti1bO88384 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Vti1bO88384 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Vti1bO88384 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Vti1bO88384 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Vti1bO88384 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
Vti1bO88384 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Vti1bO88384 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC19.7■□□□□ 0.74
Vti1bO88384 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Vti1bO88384 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC19.7■□□□□ 0.74
Vti1bO88384 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Vti1bO88384 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Vti1bO88384 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Vti1bO88384 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Vti1bO88384 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC19.69■□□□□ 0.74
Vti1bO88384 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 14 ms