Protein–RNA interactions for Protein: D3YZU1

Shank1, SH3 and multiple ankyrin repeat domains protein 1, mousemouse

Predictions only

Length 2,167 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank1D3YZU1 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Shank1D3YZU1 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Shank1D3YZU1 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Shank1D3YZU1 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Shank1D3YZU1 Krt8-ps-201ENSMUST00000208495 945 ntBASIC18.78■□□□□ 0.6
Shank1D3YZU1 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC18.78■□□□□ 0.6
Shank1D3YZU1 Wdr70-203ENSMUST00000227371 1130 ntBASIC18.78■□□□□ 0.6
Shank1D3YZU1 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Shank1D3YZU1 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Shank1D3YZU1 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Shank1D3YZU1 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC18.77■□□□□ 0.6
Shank1D3YZU1 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC18.77■□□□□ 0.6
Shank1D3YZU1 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC18.77■□□□□ 0.6
Shank1D3YZU1 Gm7291-201ENSMUST00000199147 382 ntBASIC18.77■□□□□ 0.6
Shank1D3YZU1 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Shank1D3YZU1 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Shank1D3YZU1 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Shank1D3YZU1 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
Shank1D3YZU1 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC18.76■□□□□ 0.59
Shank1D3YZU1 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Shank1D3YZU1 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Shank1D3YZU1 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Shank1D3YZU1 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
Shank1D3YZU1 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Shank1D3YZU1 AC158990.1-201ENSMUST00000221450 2016 ntBASIC18.75■□□□□ 0.59
Shank1D3YZU1 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Shank1D3YZU1 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
Shank1D3YZU1 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Shank1D3YZU1 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC18.75■□□□□ 0.59
Shank1D3YZU1 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Shank1D3YZU1 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC18.75■□□□□ 0.59
Shank1D3YZU1 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Shank1D3YZU1 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Shank1D3YZU1 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Shank1D3YZU1 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
Shank1D3YZU1 Gm8770-201ENSMUST00000121113 1109 ntBASIC18.74■□□□□ 0.59
Shank1D3YZU1 Gm8493-201ENSMUST00000196881 489 ntBASIC18.74■□□□□ 0.59
Shank1D3YZU1 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC18.74■□□□□ 0.59
Shank1D3YZU1 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Shank1D3YZU1 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Shank1D3YZU1 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Shank1D3YZU1 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
Shank1D3YZU1 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
Shank1D3YZU1 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC18.73■□□□□ 0.59
Shank1D3YZU1 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC18.73■□□□□ 0.59
Shank1D3YZU1 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC18.73■□□□□ 0.59
Shank1D3YZU1 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC18.73■□□□□ 0.59
Shank1D3YZU1 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Shank1D3YZU1 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Shank1D3YZU1 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Shank1D3YZU1 Gm27405-201ENSMUST00000184201 112 ntBASIC18.72■□□□□ 0.59
Shank1D3YZU1 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Shank1D3YZU1 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Shank1D3YZU1 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC18.72■□□□□ 0.59
Shank1D3YZU1 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Shank1D3YZU1 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Shank1D3YZU1 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC18.72■□□□□ 0.59
Shank1D3YZU1 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Shank1D3YZU1 Gm9870-201ENSMUST00000063874 645 ntBASIC18.72■□□□□ 0.59
Shank1D3YZU1 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Shank1D3YZU1 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Shank1D3YZU1 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Shank1D3YZU1 Gm42699-201ENSMUST00000198104 1657 ntBASIC18.71■□□□□ 0.59
Shank1D3YZU1 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Shank1D3YZU1 Gm10849-201ENSMUST00000100397 618 ntBASIC18.71■□□□□ 0.59
Shank1D3YZU1 Gm10493-201ENSMUST00000097270 612 ntBASIC18.71■□□□□ 0.59
Shank1D3YZU1 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Shank1D3YZU1 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC18.71■□□□□ 0.59
Shank1D3YZU1 Gm10657-201ENSMUST00000193528 1031 ntBASIC18.71■□□□□ 0.59
Shank1D3YZU1 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC18.71■□□□□ 0.59
Shank1D3YZU1 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Shank1D3YZU1 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
Shank1D3YZU1 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Shank1D3YZU1 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
Shank1D3YZU1 Gm27011-201ENSMUST00000182352 972 ntBASIC18.7■□□□□ 0.58
Shank1D3YZU1 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC18.7■□□□□ 0.58
Shank1D3YZU1 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Shank1D3YZU1 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
Shank1D3YZU1 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Shank1D3YZU1 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Shank1D3YZU1 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Shank1D3YZU1 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Shank1D3YZU1 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC18.69■□□□□ 0.58
Shank1D3YZU1 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Shank1D3YZU1 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Shank1D3YZU1 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC18.69■□□□□ 0.58
Shank1D3YZU1 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Shank1D3YZU1 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
Shank1D3YZU1 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Shank1D3YZU1 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Shank1D3YZU1 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Shank1D3YZU1 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Shank1D3YZU1 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC18.68■□□□□ 0.58
Shank1D3YZU1 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
Shank1D3YZU1 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Shank1D3YZU1 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Shank1D3YZU1 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Shank1D3YZU1 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC18.68■□□□□ 0.58
Shank1D3YZU1 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Shank1D3YZU1 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms