Protein–RNA interactions for Protein: A1A546

Isx, Intestine-specific homeobox, mousemouse

Predictions only

Length 240 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IsxA1A546 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
IsxA1A546 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
IsxA1A546 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
IsxA1A546 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
IsxA1A546 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
IsxA1A546 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
IsxA1A546 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC19.36■□□□□ 0.69
IsxA1A546 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
IsxA1A546 AC131739.1-201ENSMUST00000221692 1245 ntBASIC19.36■□□□□ 0.69
IsxA1A546 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
IsxA1A546 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
IsxA1A546 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
IsxA1A546 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
IsxA1A546 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
IsxA1A546 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
IsxA1A546 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
IsxA1A546 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
IsxA1A546 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
IsxA1A546 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC19.35■□□□□ 0.69
IsxA1A546 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
IsxA1A546 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
IsxA1A546 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC19.35■□□□□ 0.69
IsxA1A546 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
IsxA1A546 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
IsxA1A546 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
IsxA1A546 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
IsxA1A546 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
IsxA1A546 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
IsxA1A546 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
IsxA1A546 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
IsxA1A546 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
IsxA1A546 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
IsxA1A546 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
IsxA1A546 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
IsxA1A546 Gm8093-201ENSMUST00000128935 1892 ntBASIC19.34■□□□□ 0.69
IsxA1A546 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
IsxA1A546 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
IsxA1A546 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
IsxA1A546 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
IsxA1A546 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
IsxA1A546 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
IsxA1A546 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
IsxA1A546 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
IsxA1A546 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
IsxA1A546 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
IsxA1A546 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC19.32■□□□□ 0.68
IsxA1A546 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
IsxA1A546 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
IsxA1A546 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
IsxA1A546 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
IsxA1A546 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
IsxA1A546 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
IsxA1A546 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
IsxA1A546 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC19.31■□□□□ 0.68
IsxA1A546 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC19.31■□□□□ 0.68
IsxA1A546 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
IsxA1A546 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
IsxA1A546 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
IsxA1A546 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
IsxA1A546 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
IsxA1A546 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC19.3■□□□□ 0.68
IsxA1A546 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC19.3■□□□□ 0.68
IsxA1A546 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
IsxA1A546 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
IsxA1A546 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
IsxA1A546 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC19.29■□□□□ 0.68
IsxA1A546 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
IsxA1A546 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
IsxA1A546 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
IsxA1A546 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC19.29■□□□□ 0.68
IsxA1A546 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
IsxA1A546 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
IsxA1A546 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
IsxA1A546 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
IsxA1A546 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
IsxA1A546 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
IsxA1A546 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
IsxA1A546 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
IsxA1A546 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
IsxA1A546 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
IsxA1A546 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
IsxA1A546 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
IsxA1A546 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
IsxA1A546 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC19.27■□□□□ 0.68
IsxA1A546 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC19.27■□□□□ 0.68
IsxA1A546 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
IsxA1A546 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
IsxA1A546 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
IsxA1A546 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
IsxA1A546 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
IsxA1A546 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
IsxA1A546 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
IsxA1A546 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
IsxA1A546 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC19.26■□□□□ 0.67
IsxA1A546 AC164883.3-201ENSMUST00000227396 1774 ntBASIC19.26■□□□□ 0.67
IsxA1A546 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
IsxA1A546 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
IsxA1A546 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
IsxA1A546 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
IsxA1A546 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 23.1 ms