Protein–RNA interactions for Protein: Q9R1Q9

Atp6ap1, V-type proton ATPase subunit S1, mousemouse

Predictions only

Length 463 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atp6ap1Q9R1Q9 Farsb-202ENSMUST00000170217 2036 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Atp6ap1Q9R1Q9 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Atp6ap1Q9R1Q9 Gm9195-201ENSMUST00000208955 8870 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.46
Atp6ap1Q9R1Q9 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC12.21□□□□□ -0.46
Atp6ap1Q9R1Q9 Dhx58os-201ENSMUST00000137154 1594 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Atp6ap1Q9R1Q9 Zfp536-203ENSMUST00000176114 4341 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Atp6ap1Q9R1Q9 Cacna1c-227ENSMUST00000220022 7765 ntTSL 5 BASIC12.21□□□□□ -0.46
Atp6ap1Q9R1Q9 Gm20687-203ENSMUST00000185121 4242 ntTSL 2 BASIC12.21□□□□□ -0.46
Atp6ap1Q9R1Q9 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Atp6ap1Q9R1Q9 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.46
Atp6ap1Q9R1Q9 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Atp6ap1Q9R1Q9 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Atp6ap1Q9R1Q9 Mast3-203ENSMUST00000211948 4251 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Atp6ap1Q9R1Q9 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Atp6ap1Q9R1Q9 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Atp6ap1Q9R1Q9 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Atp6ap1Q9R1Q9 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Atp6ap1Q9R1Q9 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Atp6ap1Q9R1Q9 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Atp6ap1Q9R1Q9 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Atp6ap1Q9R1Q9 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Atp6ap1Q9R1Q9 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC12.2□□□□□ -0.46
Atp6ap1Q9R1Q9 Ip6k1-201ENSMUST00000035214 4559 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Atp6ap1Q9R1Q9 Cog3-203ENSMUST00000227473 4197 ntBASIC12.2□□□□□ -0.46
Atp6ap1Q9R1Q9 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC12.2□□□□□ -0.46
Atp6ap1Q9R1Q9 Gm15635-202ENSMUST00000131160 917 ntTSL 3 BASIC12.2□□□□□ -0.46
Atp6ap1Q9R1Q9 Usp46os2-201ENSMUST00000152787 831 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Atp6ap1Q9R1Q9 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Atp6ap1Q9R1Q9 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC12.2□□□□□ -0.46
Atp6ap1Q9R1Q9 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC12.2□□□□□ -0.46
Atp6ap1Q9R1Q9 Gm43118-201ENSMUST00000199149 775 ntBASIC12.2□□□□□ -0.46
Atp6ap1Q9R1Q9 Gm20083-202ENSMUST00000206663 1008 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Atp6ap1Q9R1Q9 Gm10608-202ENSMUST00000213924 676 ntBASIC12.2□□□□□ -0.46
Atp6ap1Q9R1Q9 AC112680.3-201ENSMUST00000215297 488 ntTSL 3 BASIC12.2□□□□□ -0.46
Atp6ap1Q9R1Q9 Gm36634-201ENSMUST00000218356 1259 ntTSL 3 BASIC12.2□□□□□ -0.46
Atp6ap1Q9R1Q9 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Atp6ap1Q9R1Q9 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Atp6ap1Q9R1Q9 Dlc1-201ENSMUST00000033923 6159 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Atp6ap1Q9R1Q9 Kdm2a-201ENSMUST00000047898 8578 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Atp6ap1Q9R1Q9 Gm2420-201ENSMUST00000119864 2149 ntBASIC12.2□□□□□ -0.46
Atp6ap1Q9R1Q9 Adora1-201ENSMUST00000038191 3625 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Atp6ap1Q9R1Q9 Dip2a-201ENSMUST00000036033 6322 ntAPPRIS P2 TSL 5 BASIC12.2□□□□□ -0.46
Atp6ap1Q9R1Q9 Reln-207ENSMUST00000161356 11699 ntAPPRIS P3 TSL 5 BASIC12.2□□□□□ -0.46
Atp6ap1Q9R1Q9 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Atp6ap1Q9R1Q9 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC12.2□□□□□ -0.46
Atp6ap1Q9R1Q9 Unc5c-202ENSMUST00000106236 9646 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Atp6ap1Q9R1Q9 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Atp6ap1Q9R1Q9 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Atp6ap1Q9R1Q9 Abca7-202ENSMUST00000132517 6696 ntAPPRIS P3 TSL 5 BASIC12.2□□□□□ -0.46
Atp6ap1Q9R1Q9 Asph-212ENSMUST00000108340 6646 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Atp6ap1Q9R1Q9 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC12.2□□□□□ -0.46
Atp6ap1Q9R1Q9 Ttbk2-203ENSMUST00000085840 11152 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Atp6ap1Q9R1Q9 Acvr1c-201ENSMUST00000028178 9162 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Atp6ap1Q9R1Q9 Cnmd-203ENSMUST00000165835 1362 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Atp6ap1Q9R1Q9 Dppa4-201ENSMUST00000050705 1378 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Atp6ap1Q9R1Q9 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Atp6ap1Q9R1Q9 Ikzf1-204ENSMUST00000076700 5163 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Atp6ap1Q9R1Q9 Cplx1-201ENSMUST00000046892 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Atp6ap1Q9R1Q9 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Atp6ap1Q9R1Q9 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC12.19□□□□□ -0.46
Atp6ap1Q9R1Q9 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Atp6ap1Q9R1Q9 Gm43463-201ENSMUST00000195967 1803 ntBASIC12.19□□□□□ -0.46
Atp6ap1Q9R1Q9 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Atp6ap1Q9R1Q9 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Atp6ap1Q9R1Q9 Gm12058-201ENSMUST00000118614 437 ntBASIC12.19□□□□□ -0.46
Atp6ap1Q9R1Q9 Gm13342-201ENSMUST00000121055 207 ntBASIC12.19□□□□□ -0.46
Atp6ap1Q9R1Q9 Aamdc-210ENSMUST00000146605 642 ntTSL 3 BASIC12.19□□□□□ -0.46
Atp6ap1Q9R1Q9 Gm12349-201ENSMUST00000153030 657 ntTSL 3 BASIC12.19□□□□□ -0.46
Atp6ap1Q9R1Q9 Pcgf1-202ENSMUST00000165164 918 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Atp6ap1Q9R1Q9 Gm8801-201ENSMUST00000173255 1064 ntBASIC12.19□□□□□ -0.46
Atp6ap1Q9R1Q9 Gm27243-201ENSMUST00000183964 521 ntBASIC12.19□□□□□ -0.46
Atp6ap1Q9R1Q9 Gm29396-201ENSMUST00000185659 716 ntBASIC12.19□□□□□ -0.46
Atp6ap1Q9R1Q9 Gm37201-201ENSMUST00000191845 523 ntBASIC12.19□□□□□ -0.46
Atp6ap1Q9R1Q9 Brsk1-205ENSMUST00000206024 1216 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Atp6ap1Q9R1Q9 CU024892.2-201ENSMUST00000224608 832 ntBASIC12.19□□□□□ -0.46
Atp6ap1Q9R1Q9 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Atp6ap1Q9R1Q9 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Atp6ap1Q9R1Q9 Zfp783-204ENSMUST00000130490 4419 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Atp6ap1Q9R1Q9 Prss30-201ENSMUST00000024936 1470 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Atp6ap1Q9R1Q9 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Atp6ap1Q9R1Q9 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Atp6ap1Q9R1Q9 Nmt2-202ENSMUST00000091504 1676 ntTSL 5 BASIC12.19□□□□□ -0.46
Atp6ap1Q9R1Q9 Rai1-207ENSMUST00000171108 7125 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Atp6ap1Q9R1Q9 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Atp6ap1Q9R1Q9 Gm27196-201ENSMUST00000184787 2582 ntBASIC12.19□□□□□ -0.46
Atp6ap1Q9R1Q9 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Atp6ap1Q9R1Q9 Gm2237-202ENSMUST00000170694 2090 ntAPPRIS P5 TSL 5 BASIC12.18□□□□□ -0.46
Atp6ap1Q9R1Q9 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Atp6ap1Q9R1Q9 Rap1gds1-202ENSMUST00000098574 3669 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Atp6ap1Q9R1Q9 Gm3756-201ENSMUST00000169182 1355 ntBASIC12.18□□□□□ -0.46
Atp6ap1Q9R1Q9 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Atp6ap1Q9R1Q9 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Atp6ap1Q9R1Q9 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Atp6ap1Q9R1Q9 Fuk-201ENSMUST00000041382 3838 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Atp6ap1Q9R1Q9 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Atp6ap1Q9R1Q9 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC12.18□□□□□ -0.46
Atp6ap1Q9R1Q9 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC12.18□□□□□ -0.46
Atp6ap1Q9R1Q9 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Atp6ap1Q9R1Q9 Gm17435-202ENSMUST00000212699 1998 ntBASIC12.18□□□□□ -0.46
Atp6ap1Q9R1Q9 Camta2-202ENSMUST00000100933 4383 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 74 ms