Protein–RNA interactions for Protein: Q9R1C7

Prpf40a, Pre-mRNA-processing factor 40 homolog A, mousemouse

Known RBP Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40aQ9R1C7 Gm37008-201ENSMUST00000195712 319 ntBASIC13.75□□□□□ -0.21
Prpf40aQ9R1C7 Gm44756-201ENSMUST00000206172 1069 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Prpf40aQ9R1C7 Gm45484-201ENSMUST00000210310 1141 ntBASIC13.75□□□□□ -0.21
Prpf40aQ9R1C7 AC169036.1-201ENSMUST00000227994 296 ntBASIC13.75□□□□□ -0.21
Prpf40aQ9R1C7 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Prpf40aQ9R1C7 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
Prpf40aQ9R1C7 Zfp94-201ENSMUST00000032673 2529 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
Prpf40aQ9R1C7 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Prpf40aQ9R1C7 Sf1-208ENSMUST00000131252 4353 ntAPPRIS P4 TSL 1 (best) BASIC13.75□□□□□ -0.21
Prpf40aQ9R1C7 Six4-202ENSMUST00000175693 6817 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
Prpf40aQ9R1C7 Olfr56-204ENSMUST00000203149 1808 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Prpf40aQ9R1C7 Rbm48-201ENSMUST00000042753 2368 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Prpf40aQ9R1C7 Pcdhgb2-202ENSMUST00000195112 4661 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Prpf40aQ9R1C7 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Prpf40aQ9R1C7 Ttpa-203ENSMUST00000121491 2862 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Prpf40aQ9R1C7 Gm7049-201ENSMUST00000223520 1712 ntBASIC13.75□□□□□ -0.21
Prpf40aQ9R1C7 Plcb2-206ENSMUST00000159756 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Prpf40aQ9R1C7 Ptpn14-202ENSMUST00000097442 10746 ntAPPRIS P2 TSL 5 BASIC13.75□□□□□ -0.21
Prpf40aQ9R1C7 Kcnb1-204ENSMUST00000207917 11153 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Prpf40aQ9R1C7 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Prpf40aQ9R1C7 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Prpf40aQ9R1C7 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC13.75□□□□□ -0.21
Prpf40aQ9R1C7 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Prpf40aQ9R1C7 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Prpf40aQ9R1C7 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Prpf40aQ9R1C7 9230110C19Rik-201ENSMUST00000065291 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Prpf40aQ9R1C7 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC13.74□□□□□ -0.21
Prpf40aQ9R1C7 Chmp5-201ENSMUST00000030128 1519 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Prpf40aQ9R1C7 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Prpf40aQ9R1C7 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Prpf40aQ9R1C7 Fnip2-203ENSMUST00000133154 7299 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Prpf40aQ9R1C7 Nudt18-202ENSMUST00000228554 3619 ntBASIC13.74□□□□□ -0.21
Prpf40aQ9R1C7 Tmem266-202ENSMUST00000085754 4417 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Prpf40aQ9R1C7 Elovl1-203ENSMUST00000102673 1248 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Prpf40aQ9R1C7 Gm23931-201ENSMUST00000103842 109 ntBASIC13.74□□□□□ -0.21
Prpf40aQ9R1C7 Fam71f2-201ENSMUST00000115286 1180 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Prpf40aQ9R1C7 D3Ertd751e-204ENSMUST00000119572 1011 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Prpf40aQ9R1C7 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Prpf40aQ9R1C7 Egfl7-211ENSMUST00000152988 723 ntTSL 2 BASIC13.74□□□□□ -0.21
Prpf40aQ9R1C7 Gm7809-201ENSMUST00000153199 742 ntBASIC13.74□□□□□ -0.21
Prpf40aQ9R1C7 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC13.74□□□□□ -0.21
Prpf40aQ9R1C7 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC13.74□□□□□ -0.21
Prpf40aQ9R1C7 Gm17180-201ENSMUST00000172211 435 ntTSL 3 BASIC13.74□□□□□ -0.21
Prpf40aQ9R1C7 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Prpf40aQ9R1C7 Gm6222-202ENSMUST00000182143 629 ntBASIC13.74□□□□□ -0.21
Prpf40aQ9R1C7 Gm38293-201ENSMUST00000193209 600 ntTSL 2 BASIC13.74□□□□□ -0.21
Prpf40aQ9R1C7 Gm19184-201ENSMUST00000196798 928 ntBASIC13.74□□□□□ -0.21
Prpf40aQ9R1C7 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Prpf40aQ9R1C7 Gm44124-201ENSMUST00000204159 472 ntBASIC13.74□□□□□ -0.21
Prpf40aQ9R1C7 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC13.74□□□□□ -0.21
Prpf40aQ9R1C7 Asb9-201ENSMUST00000033756 1139 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Prpf40aQ9R1C7 Ddah1-201ENSMUST00000029845 3764 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Prpf40aQ9R1C7 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC13.74□□□□□ -0.21
Prpf40aQ9R1C7 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Prpf40aQ9R1C7 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Prpf40aQ9R1C7 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Prpf40aQ9R1C7 Stau1-201ENSMUST00000049412 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Prpf40aQ9R1C7 Sorcs1-205ENSMUST00000209413 4398 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Prpf40aQ9R1C7 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC13.74□□□□□ -0.21
Prpf40aQ9R1C7 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Prpf40aQ9R1C7 Foxj3-202ENSMUST00000106310 4660 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Prpf40aQ9R1C7 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Prpf40aQ9R1C7 Rangap1-202ENSMUST00000170134 3002 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Prpf40aQ9R1C7 Prr12-201ENSMUST00000057293 7023 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Prpf40aQ9R1C7 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Prpf40aQ9R1C7 Drd1-201ENSMUST00000021932 3526 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Prpf40aQ9R1C7 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Prpf40aQ9R1C7 Lmbr1-203ENSMUST00000196321 3422 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Prpf40aQ9R1C7 A830018L16Rik-202ENSMUST00000135014 6451 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Prpf40aQ9R1C7 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Prpf40aQ9R1C7 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC13.73□□□□□ -0.21
Prpf40aQ9R1C7 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Prpf40aQ9R1C7 Lmln-201ENSMUST00000023497 6147 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Prpf40aQ9R1C7 Grm7-202ENSMUST00000172951 4197 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Prpf40aQ9R1C7 Gm18263-201ENSMUST00000220846 1928 ntBASIC13.73□□□□□ -0.21
Prpf40aQ9R1C7 Klra4-201ENSMUST00000119096 1245 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Prpf40aQ9R1C7 Gm9431-201ENSMUST00000119765 1051 ntBASIC13.73□□□□□ -0.21
Prpf40aQ9R1C7 Snhg9-201ENSMUST00000161706 183 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Prpf40aQ9R1C7 Gm20404-201ENSMUST00000174032 621 ntTSL 3 BASIC13.73□□□□□ -0.21
Prpf40aQ9R1C7 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
Prpf40aQ9R1C7 A330069E16Rik-201ENSMUST00000181191 887 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Prpf40aQ9R1C7 Gm3890-201ENSMUST00000182416 207 ntBASIC13.73□□□□□ -0.21
Prpf40aQ9R1C7 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC13.73□□□□□ -0.21
Prpf40aQ9R1C7 Gm38092-201ENSMUST00000195600 653 ntBASIC13.73□□□□□ -0.21
Prpf40aQ9R1C7 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC13.73□□□□□ -0.21
Prpf40aQ9R1C7 AC162938.2-203ENSMUST00000216604 1134 ntTSL 5 BASIC13.73□□□□□ -0.21
Prpf40aQ9R1C7 Gm17823-201ENSMUST00000217830 1006 ntBASIC13.73□□□□□ -0.21
Prpf40aQ9R1C7 AC148335.1-201ENSMUST00000218778 818 ntTSL 5 BASIC13.73□□□□□ -0.21
Prpf40aQ9R1C7 AC124742.1-201ENSMUST00000219909 547 ntTSL 3 BASIC13.73□□□□□ -0.21
Prpf40aQ9R1C7 AC154462.2-201ENSMUST00000227519 370 ntBASIC13.73□□□□□ -0.21
Prpf40aQ9R1C7 Naa10-201ENSMUST00000033763 962 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Prpf40aQ9R1C7 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Prpf40aQ9R1C7 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Prpf40aQ9R1C7 Smim1-213ENSMUST00000182151 5091 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
Prpf40aQ9R1C7 Sorcs1-206ENSMUST00000209783 3489 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Prpf40aQ9R1C7 Gm8228-201ENSMUST00000189949 2192 ntBASIC13.73□□□□□ -0.21
Prpf40aQ9R1C7 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Prpf40aQ9R1C7 Pcdhb16-201ENSMUST00000051442 5225 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
Prpf40aQ9R1C7 Map2k4-201ENSMUST00000046963 3695 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Prpf40aQ9R1C7 Fbxo46-201ENSMUST00000053109 4873 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 53.2 ms