Protein–RNA interactions for Protein: Q9JLR1

Sec61a2, Protein transport protein Sec61 subunit alpha isoform 2, mousemouse

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a2Q9JLR1 Oprd1-201ENSMUST00000056336 4021 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Sec61a2Q9JLR1 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Sec61a2Q9JLR1 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Sec61a2Q9JLR1 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Sec61a2Q9JLR1 Gm12384-201ENSMUST00000119228 919 ntBASIC11.25□□□□□ -0.61
Sec61a2Q9JLR1 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC11.25□□□□□ -0.61
Sec61a2Q9JLR1 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Sec61a2Q9JLR1 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC11.25□□□□□ -0.61
Sec61a2Q9JLR1 Ndufa2-201ENSMUST00000014438 572 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Sec61a2Q9JLR1 Snora78-201ENSMUST00000158630 128 ntBASIC11.25□□□□□ -0.61
Sec61a2Q9JLR1 Gm3893-201ENSMUST00000178882 909 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
Sec61a2Q9JLR1 Ssr2-202ENSMUST00000192495 620 ntTSL 5 BASIC11.25□□□□□ -0.61
Sec61a2Q9JLR1 Gm4768-201ENSMUST00000206199 686 ntBASIC11.25□□□□□ -0.61
Sec61a2Q9JLR1 AC148335.1-201ENSMUST00000218778 818 ntTSL 5 BASIC11.25□□□□□ -0.61
Sec61a2Q9JLR1 Mal-201ENSMUST00000028853 486 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Sec61a2Q9JLR1 Psap-203ENSMUST00000165878 2564 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Sec61a2Q9JLR1 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Sec61a2Q9JLR1 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Sec61a2Q9JLR1 AC154262.2-202ENSMUST00000225158 1331 ntBASIC11.25□□□□□ -0.61
Sec61a2Q9JLR1 Lmna-201ENSMUST00000029699 3156 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
Sec61a2Q9JLR1 Snap23-203ENSMUST00000116437 2730 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Sec61a2Q9JLR1 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
Sec61a2Q9JLR1 Mtmr4-201ENSMUST00000092802 5525 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Sec61a2Q9JLR1 Cd163l1-204ENSMUST00000209637 3210 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Sec61a2Q9JLR1 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Sec61a2Q9JLR1 Olfr279-203ENSMUST00000216822 5605 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
Sec61a2Q9JLR1 Sertad2-201ENSMUST00000093292 5647 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Sec61a2Q9JLR1 Vax2os-201ENSMUST00000123402 1435 ntTSL 5 BASIC11.25□□□□□ -0.61
Sec61a2Q9JLR1 Ddx17-201ENSMUST00000054014 4761 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Sec61a2Q9JLR1 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Sec61a2Q9JLR1 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC11.25□□□□□ -0.61
Sec61a2Q9JLR1 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Sec61a2Q9JLR1 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Sec61a2Q9JLR1 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Sec61a2Q9JLR1 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC11.25□□□□□ -0.61
Sec61a2Q9JLR1 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Sec61a2Q9JLR1 Chmp5-201ENSMUST00000030128 1519 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Sec61a2Q9JLR1 Ints6-202ENSMUST00000223585 10883 ntAPPRIS P1 BASIC11.24□□□□□ -0.61
Sec61a2Q9JLR1 Eps15l1-203ENSMUST00000212121 2686 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Sec61a2Q9JLR1 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Sec61a2Q9JLR1 Dixdc1-202ENSMUST00000117093 1613 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Sec61a2Q9JLR1 Gm6992-201ENSMUST00000217973 1607 ntBASIC11.24□□□□□ -0.61
Sec61a2Q9JLR1 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Sec61a2Q9JLR1 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Sec61a2Q9JLR1 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Sec61a2Q9JLR1 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Sec61a2Q9JLR1 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Sec61a2Q9JLR1 Ank3-201ENSMUST00000047061 2517 ntTSL 5 BASIC11.24□□□□□ -0.61
Sec61a2Q9JLR1 Gm14921-201ENSMUST00000118643 908 ntBASIC11.24□□□□□ -0.61
Sec61a2Q9JLR1 Fuom-203ENSMUST00000121115 872 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Sec61a2Q9JLR1 Gm12363-201ENSMUST00000122250 668 ntBASIC11.24□□□□□ -0.61
Sec61a2Q9JLR1 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Sec61a2Q9JLR1 Gm12347-201ENSMUST00000127883 470 ntTSL 3 BASIC11.24□□□□□ -0.61
Sec61a2Q9JLR1 Gm15046-201ENSMUST00000130153 408 ntTSL 3 BASIC11.24□□□□□ -0.61
Sec61a2Q9JLR1 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
Sec61a2Q9JLR1 Gm22121-201ENSMUST00000175148 54 ntBASIC11.24□□□□□ -0.61
Sec61a2Q9JLR1 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Sec61a2Q9JLR1 Gm37424-201ENSMUST00000191727 561 ntBASIC11.24□□□□□ -0.61
Sec61a2Q9JLR1 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC11.24□□□□□ -0.61
Sec61a2Q9JLR1 Gm36198-201ENSMUST00000217490 416 ntTSL 3 BASIC11.24□□□□□ -0.61
Sec61a2Q9JLR1 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Sec61a2Q9JLR1 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Sec61a2Q9JLR1 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Sec61a2Q9JLR1 Cox7a2-201ENSMUST00000034881 659 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Sec61a2Q9JLR1 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC11.24□□□□□ -0.61
Sec61a2Q9JLR1 1700029I15Rik-201ENSMUST00000054316 364 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Sec61a2Q9JLR1 Pdxk-201ENSMUST00000041616 5124 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Sec61a2Q9JLR1 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Sec61a2Q9JLR1 Gm6210-201ENSMUST00000204734 1942 ntBASIC11.24□□□□□ -0.61
Sec61a2Q9JLR1 Capn11-201ENSMUST00000120717 2591 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Sec61a2Q9JLR1 Gm17435-202ENSMUST00000212699 1998 ntBASIC11.24□□□□□ -0.61
Sec61a2Q9JLR1 Nexmif-203ENSMUST00000118314 11476 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Sec61a2Q9JLR1 Pou5f2-201ENSMUST00000175955 1394 ntAPPRIS P1 BASIC11.24□□□□□ -0.61
Sec61a2Q9JLR1 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Sec61a2Q9JLR1 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Sec61a2Q9JLR1 Wsb2-202ENSMUST00000111959 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Sec61a2Q9JLR1 Tom1l2-202ENSMUST00000093046 4849 ntTSL 5 BASIC11.24□□□□□ -0.61
Sec61a2Q9JLR1 Tmem63b-201ENSMUST00000113523 3284 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Sec61a2Q9JLR1 Acly-201ENSMUST00000007131 4393 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
Sec61a2Q9JLR1 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC11.23□□□□□ -0.61
Sec61a2Q9JLR1 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
Sec61a2Q9JLR1 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Sec61a2Q9JLR1 Plk2-201ENSMUST00000022212 2800 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Sec61a2Q9JLR1 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Sec61a2Q9JLR1 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Sec61a2Q9JLR1 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Sec61a2Q9JLR1 Vwa7-201ENSMUST00000007245 4313 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
Sec61a2Q9JLR1 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Sec61a2Q9JLR1 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Sec61a2Q9JLR1 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC11.23□□□□□ -0.61
Sec61a2Q9JLR1 Lrguk-202ENSMUST00000101564 967 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Sec61a2Q9JLR1 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC11.23□□□□□ -0.61
Sec61a2Q9JLR1 Gm15420-201ENSMUST00000133274 382 ntTSL 3 BASIC11.23□□□□□ -0.61
Sec61a2Q9JLR1 Snhg9-201ENSMUST00000161706 183 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Sec61a2Q9JLR1 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Sec61a2Q9JLR1 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC11.23□□□□□ -0.61
Sec61a2Q9JLR1 Asgr1-201ENSMUST00000018699 1259 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
Sec61a2Q9JLR1 Plin1-203ENSMUST00000205413 1294 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Sec61a2Q9JLR1 Tyms-ps-201ENSMUST00000219550 915 ntBASIC11.23□□□□□ -0.61
Sec61a2Q9JLR1 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 47.6 ms