Protein–RNA interactions for Protein: Q9ERD7

Tubb3, Tubulin beta-3 chain, mousemouse

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubb3Q9ERD7 Gm12349-201ENSMUST00000153030 657 ntTSL 3 BASIC12.4□□□□□ -0.42
Tubb3Q9ERD7 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC12.4□□□□□ -0.42
Tubb3Q9ERD7 Gm26542-201ENSMUST00000180443 1235 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Tubb3Q9ERD7 2010106C02Rik-201ENSMUST00000191222 660 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Tubb3Q9ERD7 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC12.4□□□□□ -0.42
Tubb3Q9ERD7 Gm38266-201ENSMUST00000194931 421 ntBASIC12.4□□□□□ -0.42
Tubb3Q9ERD7 Gm31651-201ENSMUST00000198864 560 ntTSL 3 BASIC12.4□□□□□ -0.42
Tubb3Q9ERD7 Gm43118-201ENSMUST00000199149 775 ntBASIC12.4□□□□□ -0.42
Tubb3Q9ERD7 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC12.4□□□□□ -0.42
Tubb3Q9ERD7 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC12.4□□□□□ -0.42
Tubb3Q9ERD7 Gm19163-201ENSMUST00000223313 780 ntBASIC12.4□□□□□ -0.42
Tubb3Q9ERD7 AC154462.2-201ENSMUST00000227519 370 ntBASIC12.4□□□□□ -0.42
Tubb3Q9ERD7 A430005L14Rik-201ENSMUST00000058393 1098 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Tubb3Q9ERD7 Tubd1-201ENSMUST00000020821 2070 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Tubb3Q9ERD7 Gja5-203ENSMUST00000199597 3668 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Tubb3Q9ERD7 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC12.4□□□□□ -0.42
Tubb3Q9ERD7 Tnfrsf13b-201ENSMUST00000010286 2556 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Tubb3Q9ERD7 Ptcd3-201ENSMUST00000082094 2581 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Tubb3Q9ERD7 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Tubb3Q9ERD7 Dtx1-201ENSMUST00000031607 4035 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Tubb3Q9ERD7 Oprd1-201ENSMUST00000056336 4021 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Tubb3Q9ERD7 Ikbip-201ENSMUST00000020149 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Tubb3Q9ERD7 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Tubb3Q9ERD7 Allc-202ENSMUST00000110917 1384 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Tubb3Q9ERD7 Psmd13-208ENSMUST00000163610 1382 ntTSL 5 BASIC12.4□□□□□ -0.42
Tubb3Q9ERD7 AC101945.2-201ENSMUST00000227886 1377 ntBASIC12.4□□□□□ -0.42
Tubb3Q9ERD7 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC12.4□□□□□ -0.42
Tubb3Q9ERD7 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC12.4□□□□□ -0.42
Tubb3Q9ERD7 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Tubb3Q9ERD7 Wfs1-201ENSMUST00000043964 3787 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.43
Tubb3Q9ERD7 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC12.39□□□□□ -0.43
Tubb3Q9ERD7 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Tubb3Q9ERD7 Sdc4-201ENSMUST00000017153 2458 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Tubb3Q9ERD7 Gm43579-201ENSMUST00000202387 1307 ntBASIC12.39□□□□□ -0.43
Tubb3Q9ERD7 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Tubb3Q9ERD7 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Tubb3Q9ERD7 Tmem178b-201ENSMUST00000061740 3178 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Tubb3Q9ERD7 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Tubb3Q9ERD7 Arhgap39-201ENSMUST00000036176 4500 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Tubb3Q9ERD7 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Tubb3Q9ERD7 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Tubb3Q9ERD7 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Tubb3Q9ERD7 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Tubb3Q9ERD7 Tmem219-203ENSMUST00000120007 1087 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Tubb3Q9ERD7 Gm11793-201ENSMUST00000120433 981 ntBASIC12.39□□□□□ -0.43
Tubb3Q9ERD7 Gm15351-201ENSMUST00000123920 419 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Tubb3Q9ERD7 Gm25261-201ENSMUST00000157416 134 ntBASIC12.39□□□□□ -0.43
Tubb3Q9ERD7 Gm26618-201ENSMUST00000181123 497 ntTSL 2 BASIC12.39□□□□□ -0.43
Tubb3Q9ERD7 Gm27501-201ENSMUST00000183599 107 ntBASIC12.39□□□□□ -0.43
Tubb3Q9ERD7 1500004A13Rik-208ENSMUST00000184958 823 ntTSL 3 BASIC12.39□□□□□ -0.43
Tubb3Q9ERD7 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC12.39□□□□□ -0.43
Tubb3Q9ERD7 AC166051.1-201ENSMUST00000214313 210 ntBASIC12.39□□□□□ -0.43
Tubb3Q9ERD7 AC148335.1-201ENSMUST00000218778 818 ntTSL 5 BASIC12.39□□□□□ -0.43
Tubb3Q9ERD7 AC154171.1-201ENSMUST00000224610 643 ntBASIC12.39□□□□□ -0.43
Tubb3Q9ERD7 Krtap4-7-201ENSMUST00000055121 984 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Tubb3Q9ERD7 Phf24-201ENSMUST00000069184 6392 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Tubb3Q9ERD7 Tmem40-201ENSMUST00000072933 1272 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Tubb3Q9ERD7 Gm17383-201ENSMUST00000078739 1041 ntBASIC12.39□□□□□ -0.43
Tubb3Q9ERD7 n-R5s195-201ENSMUST00000082891 119 ntBASIC12.39□□□□□ -0.43
Tubb3Q9ERD7 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Tubb3Q9ERD7 Mirt1-202ENSMUST00000180667 1633 ntTSL 5 BASIC12.39□□□□□ -0.43
Tubb3Q9ERD7 1110051M20Rik-203ENSMUST00000102594 1977 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Tubb3Q9ERD7 H3f3b-201ENSMUST00000016703 1993 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Tubb3Q9ERD7 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Tubb3Q9ERD7 Steap3-202ENSMUST00000112640 2752 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Tubb3Q9ERD7 Gm15897-201ENSMUST00000117770 1486 ntBASIC12.39□□□□□ -0.43
Tubb3Q9ERD7 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Tubb3Q9ERD7 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Tubb3Q9ERD7 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Tubb3Q9ERD7 Rapgef3-204ENSMUST00000128775 3586 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Tubb3Q9ERD7 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Tubb3Q9ERD7 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Tubb3Q9ERD7 Aifm2-203ENSMUST00000099706 3086 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Tubb3Q9ERD7 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Tubb3Q9ERD7 Atxn7l1os2-201ENSMUST00000138617 2019 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Tubb3Q9ERD7 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Tubb3Q9ERD7 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Tubb3Q9ERD7 4933412E12Rik-201ENSMUST00000217853 1698 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Tubb3Q9ERD7 Ptger4-201ENSMUST00000047379 3264 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Tubb3Q9ERD7 Pi16-202ENSMUST00000114701 2756 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Tubb3Q9ERD7 Maats1-201ENSMUST00000023501 2750 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Tubb3Q9ERD7 Tekt4-201ENSMUST00000025002 1532 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Tubb3Q9ERD7 Plekhn1-203ENSMUST00000217885 1982 ntTSL 5 BASIC12.38□□□□□ -0.43
Tubb3Q9ERD7 Cyp8b1-201ENSMUST00000062474 1950 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Tubb3Q9ERD7 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Tubb3Q9ERD7 Fancc-217ENSMUST00000163091 2995 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Tubb3Q9ERD7 Wdr89-201ENSMUST00000062370 2979 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Tubb3Q9ERD7 Spata20-201ENSMUST00000041705 2627 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Tubb3Q9ERD7 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Tubb3Q9ERD7 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
Tubb3Q9ERD7 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Tubb3Q9ERD7 C8g-201ENSMUST00000015227 822 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Tubb3Q9ERD7 Cd180-203ENSMUST00000170878 842 ntTSL 3 BASIC12.38□□□□□ -0.43
Tubb3Q9ERD7 Cd180-205ENSMUST00000172138 518 ntTSL 2 BASIC12.38□□□□□ -0.43
Tubb3Q9ERD7 Gm6222-202ENSMUST00000182143 629 ntBASIC12.38□□□□□ -0.43
Tubb3Q9ERD7 Gm5896-201ENSMUST00000189662 1024 ntBASIC12.38□□□□□ -0.43
Tubb3Q9ERD7 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC12.38□□□□□ -0.43
Tubb3Q9ERD7 Spata33-205ENSMUST00000212523 486 ntTSL 3 BASIC12.38□□□□□ -0.43
Tubb3Q9ERD7 Gm7172-201ENSMUST00000218047 1152 ntBASIC12.38□□□□□ -0.43
Tubb3Q9ERD7 AC160029.2-201ENSMUST00000218285 548 ntTSL 3 BASIC12.38□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 48.3 ms