Protein–RNA interactions for Protein: Q9DB34

Chmp2a, Charged multivesicular body protein 2a, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2aQ9DB34 Aamdc-210ENSMUST00000146605 642 ntTSL 3 BASIC13.02□□□□□ -0.33
Chmp2aQ9DB34 Gm11630-201ENSMUST00000152825 382 ntTSL 2 BASIC13.02□□□□□ -0.33
Chmp2aQ9DB34 Men1-210ENSMUST00000166909 295 ntTSL 3 BASIC13.02□□□□□ -0.33
Chmp2aQ9DB34 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Chmp2aQ9DB34 2010106C02Rik-201ENSMUST00000191222 660 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Chmp2aQ9DB34 Gm8176-201ENSMUST00000191297 1099 ntBASIC13.02□□□□□ -0.33
Chmp2aQ9DB34 4933421D24Rik-201ENSMUST00000209302 1286 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Chmp2aQ9DB34 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC13.02□□□□□ -0.33
Chmp2aQ9DB34 Tnfrsf17-201ENSMUST00000023140 815 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Chmp2aQ9DB34 Scgb3a2-201ENSMUST00000043803 842 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Chmp2aQ9DB34 Ccdc33-202ENSMUST00000098681 1093 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Chmp2aQ9DB34 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Chmp2aQ9DB34 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC13.02□□□□□ -0.33
Chmp2aQ9DB34 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Chmp2aQ9DB34 Tmub1-203ENSMUST00000115036 1455 ntTSL 5 BASIC13.02□□□□□ -0.33
Chmp2aQ9DB34 Synpo-211ENSMUST00000155195 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Chmp2aQ9DB34 Banp-210ENSMUST00000173254 1521 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Chmp2aQ9DB34 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Chmp2aQ9DB34 Flrt1-201ENSMUST00000113383 5859 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Chmp2aQ9DB34 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Chmp2aQ9DB34 Fbn1-202ENSMUST00000103234 11971 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Chmp2aQ9DB34 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Chmp2aQ9DB34 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Chmp2aQ9DB34 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Chmp2aQ9DB34 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Chmp2aQ9DB34 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Chmp2aQ9DB34 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Chmp2aQ9DB34 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Chmp2aQ9DB34 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Chmp2aQ9DB34 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC13.01□□□□□ -0.33
Chmp2aQ9DB34 Cacna1c-227ENSMUST00000220022 7765 ntTSL 5 BASIC13.01□□□□□ -0.33
Chmp2aQ9DB34 Sorcs1-206ENSMUST00000209783 3489 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Chmp2aQ9DB34 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Chmp2aQ9DB34 Gm10434-201ENSMUST00000101158 471 ntBASIC13.01□□□□□ -0.33
Chmp2aQ9DB34 Tnfrsf18-202ENSMUST00000103173 1189 ntAPPRIS P4 TSL 1 (best) BASIC13.01□□□□□ -0.33
Chmp2aQ9DB34 Gm13786-201ENSMUST00000122371 333 ntBASIC13.01□□□□□ -0.33
Chmp2aQ9DB34 Gm15351-201ENSMUST00000123920 419 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Chmp2aQ9DB34 Gm12050-201ENSMUST00000127483 615 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Chmp2aQ9DB34 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC13.01□□□□□ -0.33
Chmp2aQ9DB34 Mir8109-201ENSMUST00000184375 117 ntBASIC13.01□□□□□ -0.33
Chmp2aQ9DB34 Gm19963-201ENSMUST00000208413 1255 ntBASIC13.01□□□□□ -0.33
Chmp2aQ9DB34 Gm45720-201ENSMUST00000211881 484 ntTSL 3 BASIC13.01□□□□□ -0.33
Chmp2aQ9DB34 Ndufb3-201ENSMUST00000027193 763 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Chmp2aQ9DB34 Trex2-201ENSMUST00000033738 1017 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Chmp2aQ9DB34 Saa3-201ENSMUST00000006956 555 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Chmp2aQ9DB34 Gm6502-202ENSMUST00000097478 1218 ntTSL 5 BASIC13.01□□□□□ -0.33
Chmp2aQ9DB34 Gm37472-201ENSMUST00000192342 4052 ntBASIC13.01□□□□□ -0.33
Chmp2aQ9DB34 Allc-202ENSMUST00000110917 1384 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Chmp2aQ9DB34 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Chmp2aQ9DB34 Taldo1-204ENSMUST00000211654 1362 ntTSL 5 BASIC13.01□□□□□ -0.33
Chmp2aQ9DB34 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Chmp2aQ9DB34 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Chmp2aQ9DB34 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Chmp2aQ9DB34 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Chmp2aQ9DB34 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Chmp2aQ9DB34 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Chmp2aQ9DB34 Rlbp1-202ENSMUST00000179243 2142 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Chmp2aQ9DB34 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Chmp2aQ9DB34 AC164107.1-201ENSMUST00000227730 2161 ntBASIC13.01□□□□□ -0.33
Chmp2aQ9DB34 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Chmp2aQ9DB34 Shank2-202ENSMUST00000105900 8169 ntTSL 5 BASIC13.01□□□□□ -0.33
Chmp2aQ9DB34 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Chmp2aQ9DB34 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Chmp2aQ9DB34 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Chmp2aQ9DB34 Camsap3-203ENSMUST00000207077 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Chmp2aQ9DB34 Dgkz-203ENSMUST00000111303 4169 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Chmp2aQ9DB34 Dysf-212ENSMUST00000203695 6504 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Chmp2aQ9DB34 Grik3-201ENSMUST00000030676 8973 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Chmp2aQ9DB34 Tanc2-202ENSMUST00000100330 11855 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Chmp2aQ9DB34 Rprd1b-203ENSMUST00000109518 4399 ntTSL 1 (best) BASIC13□□□□□ -0.33
Chmp2aQ9DB34 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC13□□□□□ -0.33
Chmp2aQ9DB34 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC13□□□□□ -0.33
Chmp2aQ9DB34 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Chmp2aQ9DB34 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Chmp2aQ9DB34 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Chmp2aQ9DB34 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Chmp2aQ9DB34 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Chmp2aQ9DB34 Dhx58os-201ENSMUST00000137154 1594 ntTSL 1 (best) BASIC13□□□□□ -0.33
Chmp2aQ9DB34 Car6-201ENSMUST00000030817 1567 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Chmp2aQ9DB34 Fgd3-203ENSMUST00000110087 4698 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Chmp2aQ9DB34 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC13□□□□□ -0.33
Chmp2aQ9DB34 Efemp2-209ENSMUST00000167371 1382 ntTSL 5 BASIC13□□□□□ -0.33
Chmp2aQ9DB34 Gm15198-201ENSMUST00000117283 177 ntBASIC13□□□□□ -0.33
Chmp2aQ9DB34 Gm12241-201ENSMUST00000118330 726 ntBASIC13□□□□□ -0.33
Chmp2aQ9DB34 Tmem219-203ENSMUST00000120007 1087 ntTSL 1 (best) BASIC13□□□□□ -0.33
Chmp2aQ9DB34 Gm11964-201ENSMUST00000120982 444 ntBASIC13□□□□□ -0.33
Chmp2aQ9DB34 Mrps24-205ENSMUST00000154330 995 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Chmp2aQ9DB34 Rmrp-201ENSMUST00000157463 271 ntBASIC13□□□□□ -0.33
Chmp2aQ9DB34 Pagr1b-201ENSMUST00000172958 693 ntAPPRIS P1 TSL 3 BASIC13□□□□□ -0.33
Chmp2aQ9DB34 Gm2991-201ENSMUST00000173338 480 ntBASIC13□□□□□ -0.33
Chmp2aQ9DB34 Gm2546-201ENSMUST00000182630 991 ntBASIC13□□□□□ -0.33
Chmp2aQ9DB34 Gm4691-202ENSMUST00000182989 885 ntTSL 5 BASIC13□□□□□ -0.33
Chmp2aQ9DB34 Gm2164-201ENSMUST00000184062 424 ntTSL 2 BASIC13□□□□□ -0.33
Chmp2aQ9DB34 Gm28085-201ENSMUST00000189281 1137 ntTSL 1 (best) BASIC13□□□□□ -0.33
Chmp2aQ9DB34 Rpl7a-ps2-201ENSMUST00000200554 774 ntBASIC13□□□□□ -0.33
Chmp2aQ9DB34 Gm9368-201ENSMUST00000219348 831 ntBASIC13□□□□□ -0.33
Chmp2aQ9DB34 AL732506.1-201ENSMUST00000226420 281 ntBASIC13□□□□□ -0.33
Chmp2aQ9DB34 Ggact-201ENSMUST00000038075 1076 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Chmp2aQ9DB34 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Chmp2aQ9DB34 Gm13288-201ENSMUST00000094977 2850 ntAPPRIS P1 BASIC13□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 55.8 ms