Protein–RNA interactions for Protein: Q99PJ2

Trim8, Probable E3 ubiquitin-protein ligase TRIM8, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim8Q99PJ2 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Trim8Q99PJ2 Ivns1abp-202ENSMUST00000097543 3337 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Trim8Q99PJ2 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trim8Q99PJ2 Ush1c-206ENSMUST00000154292 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trim8Q99PJ2 Tnfrsf13b-201ENSMUST00000010286 2556 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trim8Q99PJ2 L3mbtl2-208ENSMUST00000174229 2578 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Trim8Q99PJ2 Olfr283-202ENSMUST00000215830 2392 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Trim8Q99PJ2 Rims3-202ENSMUST00000106283 6437 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Trim8Q99PJ2 Armcx3-202ENSMUST00000086880 2024 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
Trim8Q99PJ2 Rab10os-203ENSMUST00000178074 4006 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trim8Q99PJ2 Sod2-201ENSMUST00000007012 3824 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trim8Q99PJ2 Ophn1-201ENSMUST00000033560 7170 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trim8Q99PJ2 Rapgef3-204ENSMUST00000128775 3586 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trim8Q99PJ2 Zfp354c-202ENSMUST00000109135 5325 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trim8Q99PJ2 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trim8Q99PJ2 Gm38157-201ENSMUST00000194178 1698 ntBASIC12.23□□□□□ -0.45
Trim8Q99PJ2 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trim8Q99PJ2 Slc20a1-202ENSMUST00000110315 3219 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trim8Q99PJ2 Zfp467-204ENSMUST00000114559 3163 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trim8Q99PJ2 Tti2-202ENSMUST00000209851 3133 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trim8Q99PJ2 Bcl11a-201ENSMUST00000000881 3061 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trim8Q99PJ2 Flywch1-201ENSMUST00000045517 2798 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trim8Q99PJ2 Olfr649-202ENSMUST00000106859 1382 ntAPPRIS P1 TSL 3 BASIC12.23□□□□□ -0.45
Trim8Q99PJ2 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trim8Q99PJ2 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Trim8Q99PJ2 Gm38049-201ENSMUST00000195698 1372 ntBASIC12.23□□□□□ -0.45
Trim8Q99PJ2 Il2rb-201ENSMUST00000089398 2692 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trim8Q99PJ2 Acsf3-202ENSMUST00000212781 2604 ntAPPRIS ALT2 TSL 2 BASIC12.23□□□□□ -0.45
Trim8Q99PJ2 Gm43075-201ENSMUST00000198613 3905 ntBASIC12.23□□□□□ -0.45
Trim8Q99PJ2 Brap-202ENSMUST00000111765 3861 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trim8Q99PJ2 Gm11618-201ENSMUST00000117946 267 ntBASIC12.23□□□□□ -0.45
Trim8Q99PJ2 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trim8Q99PJ2 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Trim8Q99PJ2 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trim8Q99PJ2 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC12.23□□□□□ -0.45
Trim8Q99PJ2 Proscos-202ENSMUST00000178990 666 ntBASIC12.23□□□□□ -0.45
Trim8Q99PJ2 Ighv5-13-201ENSMUST00000193550 290 ntBASIC12.23□□□□□ -0.45
Trim8Q99PJ2 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trim8Q99PJ2 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trim8Q99PJ2 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trim8Q99PJ2 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trim8Q99PJ2 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trim8Q99PJ2 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trim8Q99PJ2 Eif2s1-201ENSMUST00000071230 3405 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trim8Q99PJ2 Wdr20rt-201ENSMUST00000046331 2228 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trim8Q99PJ2 Rac1-201ENSMUST00000080537 4159 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trim8Q99PJ2 Ralbp1-202ENSMUST00000166543 4089 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trim8Q99PJ2 B4galt1-201ENSMUST00000030121 3983 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trim8Q99PJ2 Gm28373-201ENSMUST00000178129 2724 ntTSL 2 BASIC12.23□□□□□ -0.45
Trim8Q99PJ2 Gm45833-201ENSMUST00000211931 2730 ntTSL 5 BASIC12.23□□□□□ -0.45
Trim8Q99PJ2 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trim8Q99PJ2 Mog-201ENSMUST00000102665 1704 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trim8Q99PJ2 Dnmt1-203ENSMUST00000178110 5870 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trim8Q99PJ2 Abi1-211ENSMUST00000149719 3303 ntAPPRIS ALT1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trim8Q99PJ2 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC12.22□□□□□ -0.45
Trim8Q99PJ2 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC12.22□□□□□ -0.45
Trim8Q99PJ2 4732471J01Rik-204ENSMUST00000206436 2430 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Trim8Q99PJ2 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trim8Q99PJ2 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Trim8Q99PJ2 AC157950.1-201ENSMUST00000217561 2168 ntBASIC12.22□□□□□ -0.45
Trim8Q99PJ2 Traf3ip2-201ENSMUST00000019987 2867 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trim8Q99PJ2 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Trim8Q99PJ2 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC12.22□□□□□ -0.45
Trim8Q99PJ2 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Trim8Q99PJ2 Kremen1-201ENSMUST00000020662 4856 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trim8Q99PJ2 Tgfb2-206ENSMUST00000195201 3485 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Trim8Q99PJ2 Gm44260-201ENSMUST00000204946 2094 ntBASIC12.22□□□□□ -0.45
Trim8Q99PJ2 Atxn7l1os2-201ENSMUST00000138617 2019 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Trim8Q99PJ2 Tns2-202ENSMUST00000169627 4707 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trim8Q99PJ2 Gabbr1-203ENSMUST00000172792 4036 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Trim8Q99PJ2 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC12.22□□□□□ -0.45
Trim8Q99PJ2 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trim8Q99PJ2 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trim8Q99PJ2 Zfp341-201ENSMUST00000081926 3299 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trim8Q99PJ2 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Trim8Q99PJ2 Phlda2-201ENSMUST00000010904 757 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trim8Q99PJ2 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Trim8Q99PJ2 Gm14760-201ENSMUST00000121831 999 ntBASIC12.22□□□□□ -0.45
Trim8Q99PJ2 P2rx4-204ENSMUST00000139631 1030 ntTSL 5 BASIC12.22□□□□□ -0.45
Trim8Q99PJ2 P2rx4-206ENSMUST00000142664 1111 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Trim8Q99PJ2 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trim8Q99PJ2 Gm45384-201ENSMUST00000210451 277 ntBASIC12.22□□□□□ -0.45
Trim8Q99PJ2 AC162801.1-201ENSMUST00000220612 198 ntBASIC12.22□□□□□ -0.45
Trim8Q99PJ2 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Trim8Q99PJ2 Med27-201ENSMUST00000028139 1254 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trim8Q99PJ2 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Trim8Q99PJ2 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trim8Q99PJ2 Tbc1d14-205ENSMUST00000136189 4436 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Trim8Q99PJ2 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC12.22□□□□□ -0.45
Trim8Q99PJ2 Foxk1-201ENSMUST00000072837 7439 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trim8Q99PJ2 Apold1-201ENSMUST00000167323 3567 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
Trim8Q99PJ2 Mapk4-202ENSMUST00000159162 3514 ntTSL 5 BASIC12.22□□□□□ -0.45
Trim8Q99PJ2 Rgma-202ENSMUST00000119206 3481 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Trim8Q99PJ2 Fbxl22-201ENSMUST00000056890 3935 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trim8Q99PJ2 Bpnt1-201ENSMUST00000027916 2200 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trim8Q99PJ2 Zfp783-204ENSMUST00000130490 4419 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Trim8Q99PJ2 A730071L15Rik-201ENSMUST00000181545 1615 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Trim8Q99PJ2 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Trim8Q99PJ2 Phf24-202ENSMUST00000107975 6494 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
Trim8Q99PJ2 Wsb2-202ENSMUST00000111959 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 44.8 ms